Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane, peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034847.1-P | Field mustard | cytosol, peroxisome, vacuole | 93.3 | 93.3 |
| CDY08532 | Canola | endoplasmic reticulum, peroxisome, vacuole | 93.3 | 93.3 |
| CDY53323 | Canola | plasma membrane | 79.9 | 89.78 |
| CDX73879 | Canola | plastid | 52.15 | 87.2 |
| AT5G05987.1 | Thale cress | cytosol, peroxisome, vacuole | 84.21 | 84.21 |
| KRH00054 | Soybean | cytosol, peroxisome, vacuole | 72.25 | 72.25 |
| KRH49188 | Soybean | cytosol, peroxisome, vacuole | 71.77 | 71.77 |
| PGSC0003DMT400022726 | Potato | endoplasmic reticulum, peroxisome, vacuole | 70.81 | 70.81 |
| Solyc09g011310.2.1 | Tomato | endoplasmic reticulum, peroxisome, vacuole | 70.81 | 70.81 |
| EES03880 | Sorghum | cytosol, peroxisome, plasma membrane | 69.86 | 69.86 |
| Solyc10g084920.1.1 | Tomato | cytosol, peroxisome, vacuole | 69.38 | 69.38 |
| PGSC0003DMT400028790 | Potato | cytosol, peroxisome, vacuole | 69.38 | 69.38 |
| HORVU1Hr1G072730.1 | Barley | cytosol, peroxisome, vacuole | 68.9 | 68.9 |
| TraesCS1A01G281600.1 | Wheat | cytosol, peroxisome, vacuole | 68.9 | 68.9 |
| TraesCS1B01G290700.1 | Wheat | cytosol, peroxisome, vacuole | 68.9 | 68.9 |
| TraesCS1D01G280800.1 | Wheat | cytosol, peroxisome, vacuole | 68.9 | 68.9 |
| Os01t0847900-01 | Rice | cytosol, peroxisome, plasma membrane | 68.42 | 68.42 |
| Os05t0455600-01 | Rice | cytosol, peroxisome, vacuole | 67.94 | 67.94 |
| KXG22142 | Sorghum | cytosol, peroxisome, vacuole | 67.94 | 67.94 |
| CDY01015 | Canola | cytosol | 93.78 | 67.12 |
| Zm00001d010055_P003 | Maize | cytosol, peroxisome, vacuole | 66.99 | 66.99 |
| AT5G02040.1 | Thale cress | cytosol, peroxisome, vacuole | 66.03 | 66.03 |
| Zm00001d042866_P001 | Maize | cytosol | 19.62 | 50.0 |
| HORVU3Hr1G085790.1 | Barley | extracellular, plasma membrane | 12.44 | 48.15 |
| TraesCS3B01G395800.1 | Wheat | cytosol, peroxisome, vacuole | 45.93 | 47.06 |
| TraesCS3A01G363600.1 | Wheat | cytosol, peroxisome, vacuole | 47.85 | 42.92 |
| TraesCS3D01G357100.1 | Wheat | mitochondrion | 48.8 | 40.96 |
| GSMUA_Achr8P02510_001 | Banana | extracellular | 3.35 | 13.73 |
Protein Annotations
| MapMan:22.8.4.3.1 | EntrezGene:2745881 | EMBL:AC008153 | ProteinID:AEE75040.1 | EMBL:AF462798 | EMBL:AK227026 |
| ArrayExpress:AT3G11397 | EnsemblPlantsGene:AT3G11397 | RefSeq:AT3G11397 | TAIR:AT3G11397 | RefSeq:AT3G11397-TAIR-G | EnsemblPlants:AT3G11397.1 |
| TAIR:AT3G11397.1 | EMBL:AY113021 | GO:GO:0003674 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005783 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0010008 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016192 | RefSeq:NP_974282.1 | PFAM:PF03208 | PO:PO:0000293 |
| Symbol:PRA1.A3 | PANTHER:PTHR12859 | PANTHER:PTHR12859:SF0 | InterPro:Prenylated_rab_accept_PRA1 | UniProt:Q8W115 | TMHMM:TMhelix |
| UniParc:UPI00000A0C6D | SEG:seg | : | : | : | : |
Description
PRA1A3PRA1 family protein A3 [Source:UniProtKB/Swiss-Prot;Acc:Q8W115]
Coordinates
chr3:+:3576017..3578082
Molecular Weight (calculated)
24099.7 Da
IEP (calculated)
10.623
GRAVY (calculated)
0.344
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: MDWDSVAAED VIEALREVEW SASPRSLAEF FSRFAFPRSF SKWMSRLKCN LYYYRTNYFI LFVFVLGLAL ITRPLAILGA ALTALSLAFL NDSFAATFNE
101: KMIRTIRHFS PHLAAKMRPP HMPVIRGRSA TRKTVYICGQ PRLVFVLLGL TASFVLWFTS CGLLWVLYAL TTALLMILLH ASLRTPNLKA RLNTFREEFR
201: AVWRNYSEL
101: KMIRTIRHFS PHLAAKMRPP HMPVIRGRSA TRKTVYICGQ PRLVFVLLGL TASFVLWFTS CGLLWVLYAL TTALLMILLH ASLRTPNLKA RLNTFREEFR
201: AVWRNYSEL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.