Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04976 | Canola | cytosol | 39.44 | 75.68 |
| HORVU3Hr1G085790.1 | Barley | extracellular, plasma membrane | 29.58 | 38.89 |
| CDX73879 | Canola | plastid | 61.97 | 35.2 |
| CDX80799 | Canola | cytosol, peroxisome, vacuole | 88.73 | 30.14 |
| CDY55115 | Canola | cytosol, peroxisome, vacuole | 88.73 | 30.14 |
| CDY16186 | Canola | mitochondrion | 87.32 | 26.96 |
| KRH49188 | Soybean | cytosol, peroxisome, vacuole | 71.83 | 24.4 |
| KRH00054 | Soybean | cytosol, peroxisome, vacuole | 71.83 | 24.4 |
| EES03880 | Sorghum | cytosol, peroxisome, plasma membrane | 71.83 | 24.4 |
| Solyc09g011310.2.1 | Tomato | endoplasmic reticulum, peroxisome, vacuole | 70.42 | 23.92 |
| PGSC0003DMT400022726 | Potato | endoplasmic reticulum, peroxisome, vacuole | 70.42 | 23.92 |
| Zm00001d010055_P003 | Maize | cytosol, peroxisome, vacuole | 69.01 | 23.45 |
| TraesCS1D01G280800.1 | Wheat | cytosol, peroxisome, vacuole | 69.01 | 23.45 |
| TraesCS1B01G290700.1 | Wheat | cytosol, peroxisome, vacuole | 69.01 | 23.45 |
| HORVU1Hr1G072730.1 | Barley | cytosol, peroxisome, vacuole | 69.01 | 23.45 |
| TraesCS1A01G281600.1 | Wheat | cytosol, peroxisome, vacuole | 69.01 | 23.45 |
| Solyc10g084920.1.1 | Tomato | cytosol, peroxisome, vacuole | 69.01 | 23.45 |
| KXG22142 | Sorghum | cytosol, peroxisome, vacuole | 69.01 | 23.45 |
| Os01t0847900-01 | Rice | cytosol, peroxisome, plasma membrane | 69.01 | 23.45 |
| PGSC0003DMT400028790 | Potato | cytosol, peroxisome, vacuole | 69.01 | 23.45 |
| CDY53323 | Canola | plasma membrane | 60.56 | 23.12 |
| Os05t0455600-01 | Rice | cytosol, peroxisome, vacuole | 67.61 | 22.97 |
| CDY08532 | Canola | endoplasmic reticulum, peroxisome, vacuole | 63.38 | 21.53 |
| CDX80980 | Canola | cytosol, peroxisome, vacuole | 59.15 | 20.1 |
| CDY04974 | Canola | cytosol, peroxisome, vacuole | 59.15 | 20.1 |
| CDY11345 | Canola | cytosol, peroxisome, vacuole | 59.15 | 20.1 |
| CDY14095 | Canola | cytosol, peroxisome, vacuole | 57.75 | 19.62 |
| CDY01015 | Canola | cytosol | 64.79 | 15.75 |
| TraesCS3B01G395800.1 | Wheat | cytosol, peroxisome, vacuole | 38.03 | 13.24 |
| TraesCS3A01G363600.1 | Wheat | cytosol, peroxisome, vacuole | 42.25 | 12.88 |
| TraesCS3D01G357100.1 | Wheat | mitochondrion | 43.66 | 12.45 |
| Zm00001d042866_P001 | Maize | cytosol | 5.63 | 4.88 |
Protein Annotations
| EnsemblPlants:CDX69570 | EnsemblPlantsGene:GSBRNA2T00135580001 | InterPro:Prenylated_rab_accept_PRA1 | PANTHER:PTHR12859 | PANTHER:PTHR12859:SF0 | PFAM:PF03208 |
| ProteinID:CDX69570 | ProteinID:CDX69570.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EE8F21 | MapMan:22.8.4.3.1 |
Description
BnaA10g19190D
Coordinates
chrLK031790:-:859542..860434
Molecular Weight (calculated)
8313.3 Da
IEP (calculated)
8.329
GRAVY (calculated)
0.700
Length
71 amino acids
Sequence
(BLAST)
(BLAST)
1: MYFETIWICC CFTVSFALWY ISCGLFTVSL ALLIGLLATI LHATLRTPNL KARLNTFREE FRAVWRNYSE I
001: MDWGNVTVDD LFDALREVDW SSPPRPPSEF FSRFTVPKSV PKWDSRLKCN LYYYRTNYFI MIVVILGLGV LTRPLAIFAA LLTALSLAFL NDSFAGSFSE
101: KATRTVRRFS PQLAAKMRPP LTPVTRGRPS SKRAIHVCGQ PRWVFVLTCS LVSFALWYIS SGLLRVSVAL LIAHLATILH ASLRTPNLKA RFNTFREEFR
201: AVWRNYSEI
101: KATRTVRRFS PQLAAKMRPP LTPVTRGRPS SKRAIHVCGQ PRWVFVLTCS LVSFALWYIS SGLLRVSVAL LIAHLATILH ASLRTPNLKA RFNTFREEFR
201: AVWRNYSEI
Arabidopsis Description
PRA1A1PRA1 family protein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZM7]
SUBAcon: [peroxisome,vacuole,cytosol]
SUBAcon: [peroxisome,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.