Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_16s0013g00170.t01 | Wine grape | cytosol | 41.7 | 86.11 |
| TraesCS3B01G221700.1 | Wheat | endoplasmic reticulum, extracellular | 72.65 | 83.94 |
| TraesCS3A01G193800.1 | Wheat | golgi | 72.65 | 83.94 |
| TraesCS3D01G196200.1 | Wheat | endoplasmic reticulum, extracellular | 72.2 | 83.42 |
| Zm00001d040752_P001 | Maize | endoplasmic reticulum, extracellular | 71.75 | 82.9 |
| EES00709 | Sorghum | endoplasmic reticulum, extracellular | 71.75 | 82.9 |
| Os01t0338000-01 | Rice | plasma membrane | 70.4 | 81.35 |
| VIT_05s0077g01230.t01 | Wine grape | endoplasmic reticulum, extracellular | 68.61 | 79.27 |
| AT4G02080.1 | Thale cress | endoplasmic reticulum | 68.61 | 79.27 |
| Bra000895.1-P | Field mustard | endoplasmic reticulum, extracellular | 68.61 | 79.27 |
| CDX90955 | Canola | endoplasmic reticulum, extracellular | 68.61 | 79.27 |
| KRH68446 | Soybean | endoplasmic reticulum | 68.61 | 79.27 |
| CDY22027 | Canola | endoplasmic reticulum, extracellular | 68.61 | 79.27 |
| KRG96730 | Soybean | endoplasmic reticulum | 68.16 | 78.76 |
| CDX91807 | Canola | endoplasmic reticulum, extracellular | 68.16 | 78.76 |
| AT1G02620.1 | Thale cress | endoplasmic reticulum | 43.05 | 78.69 |
| Solyc01g079540.2.1 | Tomato | plastid | 67.71 | 78.24 |
| PGSC0003DMT400023327 | Potato | endoplasmic reticulum, extracellular | 67.71 | 78.24 |
| VIT_07s0005g01330.t01 | Wine grape | endoplasmic reticulum, extracellular | 67.71 | 78.24 |
| PGSC0003DMT400018800 | Potato | cytosol | 67.26 | 77.72 |
| Solyc06g009660.2.1 | Tomato | extracellular | 67.26 | 77.72 |
| AT3G62560.1 | Thale cress | endoplasmic reticulum | 66.82 | 77.2 |
| KRH50759 | Soybean | endoplasmic reticulum | 66.37 | 76.68 |
| HORVU3Hr1G035000.2 | Barley | plasma membrane | 66.37 | 76.68 |
| KRH50760 | Soybean | endoplasmic reticulum | 66.37 | 76.68 |
| KRH33832 | Soybean | endoplasmic reticulum | 65.92 | 76.17 |
| KRG92955 | Soybean | endoplasmic reticulum, extracellular | 65.92 | 76.17 |
| KRH02328 | Soybean | endoplasmic reticulum | 65.92 | 76.17 |
| KRH02329 | Soybean | endoplasmic reticulum, extracellular | 65.92 | 76.17 |
| AT1G56330.1 | Thale cress | endoplasmic reticulum | 65.47 | 75.65 |
| KRH37008 | Soybean | endoplasmic reticulum | 65.47 | 75.65 |
| KRH11980 | Soybean | endoplasmic reticulum, extracellular | 65.47 | 75.65 |
| Solyc01g100350.2.1 | Tomato | plastid | 65.02 | 75.13 |
| PGSC0003DMT400007183 | Potato | endoplasmic reticulum, golgi | 65.02 | 75.13 |
| CDY41713 | Canola | endoplasmic reticulum, extracellular | 65.47 | 74.87 |
| Bra027937.1-P | Field mustard | endoplasmic reticulum, extracellular | 65.47 | 74.87 |
| CDY59269 | Canola | endoplasmic reticulum, extracellular | 65.47 | 74.87 |
| CDY65544 | Canola | endoplasmic reticulum, extracellular | 64.13 | 74.87 |
| Bra038169.1-P | Field mustard | endoplasmic reticulum, extracellular | 65.02 | 74.36 |
| CDY39001 | Canola | endoplasmic reticulum, extracellular | 65.02 | 74.36 |
| Bra018576.1-P | Field mustard | endoplasmic reticulum, golgi | 63.68 | 73.58 |
| CDX95000 | Canola | endoplasmic reticulum, golgi | 63.68 | 73.58 |
| CDX93520 | Canola | endoplasmic reticulum, golgi | 63.68 | 73.58 |
| CDY31105 | Canola | endoplasmic reticulum, golgi | 63.68 | 73.58 |
| CDY32159 | Canola | endoplasmic reticulum, golgi | 63.23 | 73.06 |
| PGSC0003DMT400068658 | Potato | endoplasmic reticulum, extracellular | 62.33 | 72.02 |
| AT1G09180.1 | Thale cress | extracellular | 62.33 | 72.02 |
| Solyc01g060130.2.1 | Tomato | endoplasmic reticulum, extracellular | 61.88 | 71.5 |
| HORVU7Hr1G080190.1 | Barley | endoplasmic reticulum | 54.71 | 63.21 |
| VIT_05s0165g00230.t01 | Wine grape | cytosol | 45.29 | 59.41 |
| VIT_14s0060g01340.t01 | Wine grape | endoplasmic reticulum, extracellular | 57.85 | 54.43 |
| Zm00001d009211_P001 | Maize | mitochondrion | 74.89 | 51.07 |
| Bra036294.1-P | Field mustard | endoplasmic reticulum | 68.16 | 37.25 |
| CDY07095 | Canola | endoplasmic reticulum | 68.16 | 37.16 |
| VIT_02s0033g01130.t01 | Wine grape | cytosol | 27.35 | 34.27 |
| HORVU6Hr1G073370.2 | Barley | cytosol | 25.11 | 30.43 |
| HORVU4Hr1G070410.2 | Barley | cytosol | 25.11 | 23.14 |
Protein Annotations
| MapMan:22.4.2.1 | Gene3D:3.40.50.300 | UniProt:A0A287KXJ2 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006810 | GO:GO:0006886 |
| GO:GO:0008150 | EnsemblPlantsGene:HORVU3Hr1G045150 | EnsemblPlants:HORVU3Hr1G045150.3 | InterPro:IPR006687 | InterPro:P-loop_NTPase | PFAM:PF00025 |
| PRINTS:PR00328 | PFscan:PS51422 | PANTHER:PTHR11711 | PANTHER:PTHR11711:SF165 | SMART:SM00177 | SMART:SM00178 |
| SUPFAM:SSF52540 | InterPro:Small_GTPase_ARF/SAR | InterPro:Small_GTPase_SAR1 | UniParc:UPI000B467C47 | SEG:seg | : |
Description
No Description!
Coordinates
chrchr3H:+:294750439..294756897
Molecular Weight (calculated)
25254.3 Da
IEP (calculated)
10.059
GRAVY (calculated)
-0.371
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: GSKRERFRSI LASLCPSPVS SPRSTRRSLS PPSPRSAPEN PAQWKRCSSR RRSAAGDADK MFLWDWFYGV LASLGLWQKE AKILFLGLDN AGKIKFKAFD
101: LGGHQIARRV WKDYYARVDA VVYLVDAYDK ERFTESKKEL DALLSDDSLA NVPFLILGNK IDIPYAASEE ELRYHLGLSN FTTGKGKVNL VDSNVRPLEV
201: FMCSVVRKMG YGDGFKWVSQ YIK
101: LGGHQIARRV WKDYYARVDA VVYLVDAYDK ERFTESKKEL DALLSDDSLA NVPFLILGNK IDIPYAASEE ELRYHLGLSN FTTGKGKVNL VDSNVRPLEV
201: FMCSVVRKMG YGDGFKWVSQ YIK
001: MGPLTRVLIL VEWFSQVDAL VYLVDAYDQE RFAESKKELD ALLSDESLAT VPFLILGNKI DIPYAASEDE LRFHLGLSNF TTGKGKVNLT DSNVRPLEVF
101: MCSIVRKMGY GEGFKWLSQY IK
101: MCSIVRKMGY GEGFKWLSQY IK
Arabidopsis Description
Ras-related small GTP-binding family protein [Source:UniProtKB/TrEMBL;Acc:Q3E6Q3]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.