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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • cytosol 3
  • endoplasmic reticulum 6
  • golgi 4
  • extracellular 3
  • vacuole 3
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi
Any Predictor:cytosol, secretory
BaCelLo:cytosol
EpiLoc:endoplasmic reticulum
MultiLoc:golgi
Plant-mPloc:cytosol, endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:endoplasmic reticulum
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra004965.1-P
Bra005704.1-P
Bra010452.1-P
Bra013908.1-P
Bra013910.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G09180.1 Bra004965.1-P AT2G40380.1 21798944
AT1G09180.1 Bra010452.1-P AT4G25660.1 21798944
AT1G09180.1 Bra013908.1-P AT4G25660.1 21798944
AT1G09180.1 Bra013910.1-P AT4G25660.1 21798944
AT1G09180.1 Bra010452.1-P AT4G25680.1 21798944
AT1G09180.1 Bra013908.1-P AT4G25680.1 21798944
AT1G09180.1 Bra013910.1-P AT4G25680.1 21798944
AT1G09180.1 Bra005704.1-P AT5G02040.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX95000 Canola endoplasmic reticulum, golgi 100.0 100.0
CDX93520 Canola endoplasmic reticulum, golgi 100.0 100.0
CDY31105 Canola endoplasmic reticulum, golgi 99.48 99.48
CDY32159 Canola endoplasmic reticulum, golgi 98.96 98.96
Bra038169.1-P Field mustard endoplasmic reticulum, extracellular 94.3 93.33
Bra027937.1-P Field mustard endoplasmic reticulum, extracellular 93.78 92.82
Bra000895.1-P Field mustard endoplasmic reticulum, extracellular 91.71 91.71
AT1G09180.1 Thale cress extracellular 91.19 91.19
TraesCS5A01G089200.1 Wheat golgi 91.19 91.19
Os01t0338000-01 Rice plasma membrane 91.19 91.19
PGSC0003DMT400007183 Potato endoplasmic reticulum, golgi 91.19 91.19
Solyc01g100350.2.1 Tomato plastid 91.19 91.19
KRG92955 Soybean endoplasmic reticulum, extracellular 90.67 90.67
TraesCS5D01G101300.1 Wheat golgi 90.67 90.67
Os12t0560300-01 Rice plasma membrane 90.67 90.67
KRH33832 Soybean endoplasmic reticulum 90.16 90.16
EES00709 Sorghum endoplasmic reticulum, extracellular 90.16 90.16
Zm00001d040752_P001 Maize endoplasmic reticulum, extracellular 90.16 90.16
TraesCS5B01G095200.1 Wheat endoplasmic reticulum, extracellular 90.16 90.16
TraesCS3A01G193800.1 Wheat golgi 89.64 89.64
TraesCS3B01G221700.1 Wheat endoplasmic reticulum, extracellular 89.64 89.64
KRG96730 Soybean endoplasmic reticulum 89.64 89.64
KXG23692 Sorghum endoplasmic reticulum, extracellular 89.12 89.12
KRH68446 Soybean endoplasmic reticulum 89.12 89.12
TraesCS3D01G196200.1 Wheat endoplasmic reticulum, extracellular 89.12 89.12
Os01t0254000-01 Rice plasma membrane 88.08 88.08
Zm00001d040278_P001 Maize extracellular 87.56 87.56
EES02699 Sorghum endoplasmic reticulum, extracellular 87.56 87.56
HORVU3Hr1G035000.2 Barley plasma membrane 87.05 87.05
TraesCS3B01G203800.1 Wheat endoplasmic reticulum 87.05 87.05
TraesCS3A01G172900.1 Wheat golgi 87.05 87.05
PGSC0003DMT400068658 Potato endoplasmic reticulum, extracellular 86.01 86.01
Solyc01g060130.2.1 Tomato endoplasmic reticulum, extracellular 85.49 85.49
VIT_16s0013g00170.t01 Wine grape cytosol 47.15 84.26
TraesCS3D01G179300.1 Wheat endoplasmic reticulum, extracellular 87.05 83.58
TraesCS7B01G236300.1 Wheat cytosol 78.76 78.76
TraesCS7D01G332100.1 Wheat endoplasmic reticulum 78.24 78.24
EES15193 Sorghum endoplasmic reticulum 78.76 77.95
KXG28257 Sorghum endoplasmic reticulum 78.24 77.84
HORVU7Hr1G080190.1 Barley endoplasmic reticulum 77.72 77.72
Zm00001d049068_P001 Maize cytosol 77.72 77.32
Os06t0225000-00 Rice endoplasmic reticulum 76.68 76.29
VIT_14s0060g01340.t01 Wine grape endoplasmic reticulum, extracellular 80.83 65.82
HORVU3Hr1G045150.3 Barley plastid 73.58 63.68
Zm00001d009211_P001 Maize mitochondrion 90.16 53.21
Bra036294.1-P Field mustard endoplasmic reticulum 91.19 43.14
Bra024440.1-P Field mustard cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 31.61 33.15
Bra037841.1-P Field mustard cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 31.09 32.61
Bra012918.1-P Field mustard cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 30.57 32.07
Bra031680.1-P Field mustard cytosol 26.94 31.9
Bra028142.1-P Field mustard cytosol 30.05 31.52
GSMUA_Achr11P... Banana mitochondrion, plastid 34.2 27.16
Bra029979.1-P Field mustard mitochondrion 16.58 19.05
Protein Annotations
MapMan:22.4.2.1Gene3D:3.40.50.300EnsemblPlantsGene:Bra018576EnsemblPlants:Bra018576.1EnsemblPlants:Bra018576.1-PGO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0005525GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005783GO:GO:0005794GO:GO:0006810GO:GO:0006886GO:GO:0008150
GO:GO:0009507GO:GO:0009536GO:GO:0015031GO:GO:0016192InterPro:IPR006687UniProt:M4DPY5
InterPro:P-loop_NTPasePFAM:PF00025PRINTS:PR00328PFscan:PS51422PANTHER:PTHR11711PANTHER:PTHR11711:SF165
SMART:SM00177SMART:SM00178SUPFAM:SSF52540InterPro:Small_GTP-bd_domInterPro:Small_GTPase_ARF/SARInterPro:Small_GTPase_SAR1
TIGRFAMs:TIGR00231UniParc:UPI0001BA4367SEG:seg:::
Description
AT1G56330 (E=1e-084) SAR1, ATSAR1, ATSARA1B, ATSAR1B | ATSAR1B (SECRETION-ASSOCIATED RAS 1 B); GTP binding
Coordinates
chrA06:-:3145079..3146001
Molecular Weight (calculated)
22080.7 Da
IEP (calculated)
7.073
GRAVY (calculated)
-0.103
Length
193 amino acids
Sequence
(BLAST)
001: MFLFDWFYGI LATLGLWQKE AKILFLGLDN AGKTTLLHML KDERLVQHQP TQHPTSEELS IGKIKFKAFD LGGHQIARRV WKDYYAKVDA VVYLVDAYDK
101: ERFVESKREL DALLSDEALA SVPFLILGNK IDIPYAASED ELRYHLGLTN FTTGKSNVSL GESGVRPLEV FMCSIVRKMG YGEGFKWLSY YIK
Best Arabidopsis Sequence Match ( AT1G56330.1 )
(BLAST)
001: MFLFDWFYGI LASLGLWQKE AKILFLGLDN AGKTTLLHML KDERLVQHQP TQHPTSEELS IGKIKFKAFD LGGHQIARRV WKDYYAKVDA VVYLVDAYDK
101: ERFAESKREL DALLSDEALA TVPFLILGNK IDIPYAASED ELRYHLGLTN FTTGKGKVTL GDSGVRPLEV FMCSIVRKMG YGEGFKWLSQ YIN
Arabidopsis Description
SAR1BSAR1B [Source:UniProtKB/TrEMBL;Acc:A0A178WM97]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.