Factsheet for Bra024440.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

nucleus 2
cytosol 3
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08727	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	100.0	100.0
Bra037841.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	97.83	97.83
AT5G67560.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	96.2	96.2
Bra012918.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	94.02	94.02
VIT_00s0601g00030.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	92.39	92.39
PGSC0003DMT400008577	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	91.85	91.85
Solyc02g064640.2.1	Tomato	extracellular	91.85	91.85
KRH58117	Soybean	endoplasmic reticulum	91.3	91.3
KRH28350	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	91.3	91.3
KRH77133	Soybean	endoplasmic reticulum	90.76	90.76
Solyc02g092330.2.1	Tomato	plastid	90.76	90.76
PGSC0003DMT400055238	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	90.22	90.22
GSMUA_Achr8P30960_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	90.22	90.22
PGSC0003DMT400023482	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	89.13	89.13
Solyc03g043960.2.1	Tomato	plastid	88.59	88.59
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	88.04	88.04
GSMUA_Achr1P22490_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	85.33	85.33
TraesCS4A01G045000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	84.24	84.24
TraesCS4B01G260300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	84.24	84.24
TraesCS4D01G260100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	84.24	84.24
EER92687	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	83.7	83.7
Os03t0200800-01	Rice	plasma membrane	83.7	83.7
Zm00001d048155_P001	Maize	extracellular	82.07	82.07
Zm00001d028112_P001	Maize	extracellular	80.43	80.43
Bra028142.1-P	Field mustard	cytosol	78.26	78.26
Bra031680.1-P	Field mustard	cytosol	63.04	71.17
HORVU4Hr1G070410.2	Barley	cytosol	84.24	64.05
Bra029979.1-P	Field mustard	mitochondrion	37.5	41.07
Bra000895.1-P	Field mustard	endoplasmic reticulum, extracellular	34.24	32.64
Bra038169.1-P	Field mustard	endoplasmic reticulum, extracellular	33.7	31.79
Bra027937.1-P	Field mustard	endoplasmic reticulum, extracellular	33.7	31.79
Bra018576.1-P	Field mustard	endoplasmic reticulum, golgi	33.15	31.61
Bra036294.1-P	Field mustard	endoplasmic reticulum	33.7	15.2

Protein Annotations

MapMan:26.10.2.4	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra024440	EnsemblPlants:Bra024440.1	EnsemblPlants:Bra024440.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	InterPro:IPR024156
UniProt:M4E6N6	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF231	SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI000253EEC1	:	:

Description

AT5G67560 (E=5e-100) ATARLA1D | ATARLA1D (ADP-ribosylation factor-like A1D); GTP binding

Coordinates

chrA06:-:15780399..15781820

Molecular Weight (calculated)

20412.7 Da

IEP (calculated)

7.291

GRAVY (calculated)

-0.040

Length

184 amino acids

Sequence
(BLAST)

001: MGLWDAFLNW LRSLFFKQEM ELSLIGLQNA GKTSLVNVVA TGGYSEDMIP TVGFNMRKVT KGSVTIKLWD LGGQPRFRSM WERYCRSVSA IVYVVDAADP
101: DNLSVSKSEL HDLLSKTSLS GIPLLVLGNK IDKPGALSKD DLTEEMGLKS LTDREVCCFM ISCKNSTNID QVIDWLVKHS KSAS

Best Arabidopsis Sequence Match ( AT5G67560.1 )
(BLAST)

001: MGLWDALLNW LRSLFFKQEM ELSLIGLQNA GKTSLVNVVA TGGYSEDMIP TVGFNMRKVT KGSVTIKLWD LGGQPRFRSM WERYCRSVSA IVYVVDAADP
101: DNLSVSKSEL HDLLSKTSLN GIPLLVLGNK IDKPGALSKE ALTDEMGLKS LTDREVCCFM ISCKNSTNID QVIDWLVKHS KSSN

Arabidopsis Description

ARL8BADP-ribosylation factor-like protein 8b [Source:UniProtKB/Swiss-Prot;Acc:Q93Y31]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.