Factsheet for Bra029979.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
nucleus 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68554	Canola	cytosol	33.33	43.41
Bra031680.1-P	Field mustard	cytosol	39.88	41.1
Bra012918.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	43.45	39.67
AT3G49870.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.26	38.59
Solyc02g064640.2.1	Tomato	extracellular	42.26	38.59
PGSC0003DMT400008577	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	41.67	38.04
VIT_00s0601g00030.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	41.67	38.04
GSMUA_Achr8P30960_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	41.67	38.04
Bra024440.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	41.07	37.5
KRH28350	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	41.07	37.5
Bra037841.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	41.07	37.5
PGSC0003DMT400055238	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	40.48	36.96
KRH58117	Soybean	endoplasmic reticulum	40.48	36.96
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	40.48	36.96
Solyc02g092330.2.1	Tomato	plastid	40.48	36.96
Solyc03g043960.2.1	Tomato	plastid	39.88	36.41
KRH77133	Soybean	endoplasmic reticulum	39.88	36.41
GSMUA_Achr1P22490_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	39.29	35.87
EER92687	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	39.29	35.87
TraesCS4D01G260100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	39.29	35.87
Os03t0200800-01	Rice	plasma membrane	39.29	35.87
TraesCS4A01G045000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	39.29	35.87
PGSC0003DMT400023482	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	39.29	35.87
TraesCS4B01G260300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	39.29	35.87
Zm00001d048155_P001	Maize	extracellular	38.1	34.78
Zm00001d028112_P001	Maize	extracellular	37.5	34.24
Bra028142.1-P	Field mustard	cytosol	36.31	33.15
AT3G49860.1	Thale cress	cytosol	32.14	30.68
HORVU4Hr1G070410.2	Barley	cytosol	39.29	27.27
Bra000895.1-P	Field mustard	endoplasmic reticulum, extracellular	19.64	17.1
Bra018576.1-P	Field mustard	endoplasmic reticulum, golgi	19.05	16.58
Bra038169.1-P	Field mustard	endoplasmic reticulum, extracellular	18.45	15.9
Bra027937.1-P	Field mustard	endoplasmic reticulum, extracellular	18.45	15.9
Bra036294.1-P	Field mustard	endoplasmic reticulum	20.24	8.33

Protein Annotations

EnsemblPlants:Bra029979.1	EnsemblPlants:Bra029979.1-P	EnsemblPlantsGene:Bra029979	Gene3D:3.40.50.300	InterPro:P-loop_NTPase	PANTHER:PTHR11711
PANTHER:PTHR11711:SF231	SUPFAM:SSF52540	UniParc:UPI0002544342	UniProt:M4EMF9	MapMan:35.1	:

Description

AT5G67560 (E=3e-011) ATARLA1D | ATARLA1D (ADP-ribosylation factor-like A1D); GTP binding

Coordinates

chrA01:-:15475491..15476599

Molecular Weight (calculated)

19445.0 Da

IEP (calculated)

8.850

GRAVY (calculated)

0.105

Length

168 amino acids

Sequence
(BLAST)

001: MGWWEASLNW LRRASKCGKT SLINVVEYNL FISKNELHNL CKTSRNGIPL LVLGNKMDEP GALFLQLYPL QKQHKSHQIM FFLINVYIYI YCDCRGLQLF
101: TDREVCCFMI SCKKYANIDE VFDWLLKHSK SNKFLSLLCC VPCSRLFSRV KQEFAPAAGL FQSGLVSI

Best Arabidopsis Sequence Match ( AT3G49870.2 )
(BLAST)

001: MELSLIGLQN AGKTSLVNVV ATGGYSEDMI PTVGFNMRKV TKGNVTIKLW DLGGQPRFRS MWERYCRAVS AIVYVVDAAD PDNLSVSKSE LHDLLSKTSL
101: NGIPLLVLGN KIDKPGALSK EALTDEMGLT SLTDREVCCF MISCKNSTNI DQVIDWLVKH SKSKN

Arabidopsis Description

ARL8AADP-ribosylation factor-like protein 8a [Source:UniProtKB/Swiss-Prot;Acc:Q8VY57]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.