Factsheet for Bra031680.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06369	Canola	cytosol	98.77	88.46
AT3G49870.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	73.01	64.67
Bra012918.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	73.01	64.67
Bra024440.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	71.17	63.04
VIT_00s0601g00030.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	70.55	62.5
Solyc02g064640.2.1	Tomato	extracellular	69.33	61.41
Bra037841.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	69.33	61.41
PGSC0003DMT400008577	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	68.71	60.87
KRH58117	Soybean	endoplasmic reticulum	68.1	60.33
GSMUA_Achr8P30960_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	68.1	60.33
KRH28350	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	68.1	60.33
Solyc02g092330.2.1	Tomato	plastid	67.48	59.78
PGSC0003DMT400055238	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	66.87	59.24
Solyc03g043960.2.1	Tomato	plastid	66.87	59.24
KRH77133	Soybean	endoplasmic reticulum	66.87	59.24
AT3G49860.1	Thale cress	cytosol	63.8	59.09
PGSC0003DMT400023482	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	66.26	58.7
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	66.26	58.7
TraesCS4B01G260300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	65.03	57.61
GSMUA_Achr1P22490_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	65.03	57.61
EER92687	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	65.03	57.61
TraesCS4A01G045000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	65.03	57.61
TraesCS4D01G260100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	65.03	57.61
Os03t0200800-01	Rice	plasma membrane	64.42	57.07
Zm00001d028112_P001	Maize	extracellular	64.42	57.07
Zm00001d048155_P001	Maize	extracellular	63.8	56.52
Bra028142.1-P	Field mustard	cytosol	60.12	53.26
HORVU4Hr1G070410.2	Barley	cytosol	65.03	43.8
Bra029979.1-P	Field mustard	mitochondrion	41.1	39.88
Bra000895.1-P	Field mustard	endoplasmic reticulum, extracellular	33.13	27.98
Bra018576.1-P	Field mustard	endoplasmic reticulum, golgi	31.9	26.94
Bra027937.1-P	Field mustard	endoplasmic reticulum, extracellular	31.9	26.67
Bra038169.1-P	Field mustard	endoplasmic reticulum, extracellular	31.29	26.15
Bra036294.1-P	Field mustard	endoplasmic reticulum	32.52	12.99

Protein Annotations

MapMan:26.10.2.4	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra031680	EnsemblPlants:Bra031680.1	EnsemblPlants:Bra031680.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	InterPro:IPR024156
UniProt:M4ESA2	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF231	SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI0002543229	SEG:seg	:

Description

AT3G49870 (E=2e-055) ATARLA1C | ATARLA1C (ADP-ribosylation factor-like A1C); GTP binding

Coordinates

chrA09:+:35270475..35271302

Molecular Weight (calculated)

18227.0 Da

IEP (calculated)

5.273

GRAVY (calculated)

-0.152

Length

163 amino acids

Sequence
(BLAST)

001: MELSLMGLQN AGKTALINAV DNVGYSEDLD PTIGFHMREV TKRNVILKLR DGSGQSGFRS FWEGFCRDNP AKVYVVDAAD VDNLFISKKE LHKLLSKTSL
101: NGIPLLVLGN KMDEPGALSK DAFTEEMGLQ LLSDREVCCF MISCKNYTNI DQVFDWLLSK LKN

Best Arabidopsis Sequence Match ( AT3G49870.2 )
(BLAST)

001: MELSLIGLQN AGKTSLVNVV ATGGYSEDMI PTVGFNMRKV TKGNVTIKLW DLGGQPRFRS MWERYCRAVS AIVYVVDAAD PDNLSVSKSE LHDLLSKTSL
101: NGIPLLVLGN KIDKPGALSK EALTDEMGLT SLTDREVCCF MISCKNSTNI DQVIDWLVKH SKSKN

Arabidopsis Description

ARL8AADP-ribosylation factor-like protein 8a [Source:UniProtKB/Swiss-Prot;Acc:Q8VY57]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.