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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, secretory
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra031680.1-P Field mustard cytosol 88.46 98.77
CDY23031 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 73.63 72.83
CDY02106 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 73.63 72.83
AT3G49870.1 Thale cress cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 73.08 72.28
CDY08727 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 71.43 70.65
CDY36501 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 71.43 70.65
VIT_00s0601g00030.t01 Wine grape cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 71.43 70.65
CDY18665 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 70.88 70.11
Solyc02g064640.2.1 Tomato extracellular 70.33 69.57
PGSC0003DMT400008577 Potato cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 69.78 69.02
CDX81307 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 69.78 69.02
GSMUA_Achr8P30960_001 Banana cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 69.23 68.48
KRH28350 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 69.23 68.48
CDX68554 Canola cytosol 48.35 68.22
KRH58117 Soybean endoplasmic reticulum 68.68 67.93
KRH77133 Soybean endoplasmic reticulum 68.13 67.39
Solyc02g092330.2.1 Tomato plastid 68.13 67.39
PGSC0003DMT400055238 Potato cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 67.58 66.85
GSMUA_AchrUn_... Banana cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 67.03 66.3
Solyc03g043960.2.1 Tomato plastid 67.03 66.3
PGSC0003DMT400023482 Potato cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 66.48 65.76
GSMUA_Achr1P22490_001 Banana cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 65.93 65.22
EER92687 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 65.93 65.22
TraesCS4A01G045000.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 65.93 65.22
TraesCS4B01G260300.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 65.93 65.22
TraesCS4D01G260100.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 65.93 65.22
Os03t0200800-01 Rice plasma membrane 65.38 64.67
Zm00001d028112_P001 Maize extracellular 64.84 64.13
Zm00001d048155_P001 Maize extracellular 64.84 64.13
CDY43583 Canola cytosol 25.82 61.84
AT3G49860.1 Thale cress cytosol 59.34 61.36
CDY37846 Canola cytosol, mitochondrion, nucleus, plastid 39.01 55.47
HORVU4Hr1G070410.2 Barley cytosol 65.93 49.59
CDY01715 Canola cytosol 53.3 43.11
CDY01716 Canola cytosol 53.3 43.11
CDX74569 Canola cytosol 53.3 42.92
CDX91807 Canola endoplasmic reticulum, extracellular 32.42 30.57
CDY22027 Canola endoplasmic reticulum, extracellular 31.87 30.05
CDX90955 Canola endoplasmic reticulum, extracellular 31.87 30.05
CDY31105 Canola endoplasmic reticulum, golgi 30.77 29.02
CDX95000 Canola endoplasmic reticulum, golgi 30.77 29.02
CDX93520 Canola endoplasmic reticulum, golgi 30.77 29.02
CDY32159 Canola endoplasmic reticulum, golgi 30.77 29.02
CDY65544 Canola endoplasmic reticulum, extracellular 30.22 28.8
CDY41713 Canola endoplasmic reticulum, extracellular 30.77 28.72
CDY59269 Canola endoplasmic reticulum, extracellular 30.77 28.72
CDY39001 Canola endoplasmic reticulum, extracellular 30.22 28.21
CDY07095 Canola endoplasmic reticulum 31.32 13.94
CDY22028 Canola nucleus 14.84 13.17
Protein Annotations
MapMan:26.10.2.4Gene3D:3.40.50.300GO:A0A078F0J4EnsemblPlants:CDY06369ProteinID:CDY06369ProteinID:CDY06369.1
GO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0005525GO:GO:0005575GO:GO:0005622
GO:GO:0005623EnsemblPlantsGene:GSBRNA2T00122306001InterPro:IPR024156InterPro:P-loop_NTPasePFAM:PF00025PRINTS:PR00328
PFscan:PS51417PANTHER:PTHR11711PANTHER:PTHR11711:SF231SMART:SM00175SMART:SM00177SMART:SM00178
SUPFAM:SSF52540InterPro:Small_GTP-bd_domInterPro:Small_GTPase_ARFInterPro:Small_GTPase_ARF/SARTIGRFAMs:TIGR00231UniParc:UPI0004EEED6C
SEG:seg:::::
Description
BnaA09g48340D
Coordinates
chrLK031968:-:1009270..1010366
Molecular Weight (calculated)
20580.9 Da
IEP (calculated)
4.863
GRAVY (calculated)
-0.102
Length
182 amino acids
Sequence
(BLAST)
001: MSLWEASLSW LRGLFFKQEM ELSLMGLQNA GKTALINAVD NVGYSEDLDP TIGFHMREVT KRNVILKLRD GSGQSGFRSF WEGFCRDNPA IVYVVDAADV
101: DNLFISKKEL HKLLSKTSLN DIPLLVLGNK MDEPGALSKD AFTEEMGLQL LSDREVCCFM ISCKNYTNID QVFDWLLSKL KN
Best Arabidopsis Sequence Match ( AT3G49860.1 )
(BLAST)
001: MTLQPNLQAK EMELSLVGLQ NSGKTSLVNV VATGEYSEDM IPTVGFNMRK VTKENVAIRL WDLGGQPRFR CMWERYCRAV SMIVYVVDAA DTENLSVSRS
101: ELHDLLSNAS LIGIPLLVLG NKIDIHGALS KEALTEEMGL SSVTSREVCC LMISCKNPTT IDQLTDWLVN HSKSKN
Arabidopsis Description
ARL8DADP-ribosylation factor-like protein 8d [Source:UniProtKB/Swiss-Prot;Acc:F4IZ82]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.