CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08727	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	63.28	44.02
CDY36501	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	62.5	43.48
CDY18665	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	62.5	43.48
CDX81307	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	61.72	42.93
CDY23031	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	61.72	42.93
CDY02106	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	61.72	42.93
CDY06369	Canola	cytosol	55.47	39.01
CDX68554	Canola	cytosol	24.22	24.03
CDY01715	Canola	cytosol	35.94	20.44
CDY01716	Canola	cytosol	35.94	20.44
CDX74569	Canola	cytosol	35.94	20.35
CDY22027	Canola	endoplasmic reticulum, extracellular	27.34	18.13
CDX91807	Canola	endoplasmic reticulum, extracellular	27.34	18.13
CDX90955	Canola	endoplasmic reticulum, extracellular	27.34	18.13
CDX95000	Canola	endoplasmic reticulum, golgi	26.56	17.62
CDX93520	Canola	endoplasmic reticulum, golgi	26.56	17.62
CDY31105	Canola	endoplasmic reticulum, golgi	26.56	17.62
CDY32159	Canola	endoplasmic reticulum, golgi	26.56	17.62
CDY65544	Canola	endoplasmic reticulum, extracellular	25.78	17.28
CDY39001	Canola	endoplasmic reticulum, extracellular	25.78	16.92
CDY41713	Canola	endoplasmic reticulum, extracellular	25.78	16.92
CDY59269	Canola	endoplasmic reticulum, extracellular	25.78	16.92
CDY43583	Canola	cytosol	6.25	10.53
CDY07095	Canola	endoplasmic reticulum	27.34	8.56
CDY22028	Canola	nucleus	12.5	7.8

Protein Annotations

EnsemblPlants:CDY37846	EnsemblPlantsGene:GSBRNA2T00064802001	Gene3D:3.40.50.300	GO:A0A078HJJ5	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005525	InterPro:P-loop_NTPase	InterPro:Small_GTPase_ARF/SAR	PANTHER:PTHR11711	PANTHER:PTHR11711:SF231
PFAM:PF00025	ProteinID:CDY37846	ProteinID:CDY37846.1	SEG:seg	SUPFAM:SSF52540	UniParc:UPI0004EE7A5A
UniProt:A0A078HJJ5	MapMan:35.1	:	:	:	:

Description

BnaAnng05070DBnaAnng05070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HJJ5]

Coordinates

chrLK032409:-:297453..298191

Molecular Weight (calculated)

14028.1 Da

IEP (calculated)

7.880

GRAVY (calculated)

0.047

Length

128 amino acids

Sequence
(BLAST)

001: MLLKYQNGGG HCRDRLYHYS GISVVNLAST YNLCVSKSEL HDLLSNTSLN GIPLLVLGNK IDKPGALSKD DLTEEMGLNR EVCCFMISCK NSTNIDQVID
101: WLVKHSKSAT LNTTLSLSLS LSKLLIGL

Best Arabidopsis Sequence Match ( AT5G67560.1 )
(BLAST)

001: MGLWDALLNW LRSLFFKQEM ELSLIGLQNA GKTSLVNVVA TGGYSEDMIP TVGFNMRKVT KGSVTIKLWD LGGQPRFRSM WERYCRSVSA IVYVVDAADP
101: DNLSVSKSEL HDLLSKTSLN GIPLLVLGNK IDKPGALSKE ALTDEMGLKS LTDREVCCFM ISCKNSTNID QVIDWLVKHS KSSN

Arabidopsis Description

ARL8BADP-ribosylation factor-like protein 8b [Source:UniProtKB/Swiss-Prot;Acc:Q93Y31]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.