Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 1
- endoplasmic reticulum 4
- extracellular 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY22027 | Canola | endoplasmic reticulum, extracellular | 46.94 | 99.48 |
| CDX90955 | Canola | endoplasmic reticulum, extracellular | 46.7 | 98.96 |
| CDX91807 | Canola | endoplasmic reticulum, extracellular | 46.45 | 98.45 |
| AT4G02080.1 | Thale cress | endoplasmic reticulum | 46.21 | 97.93 |
| TraesCS3A01G193800.1 | Wheat | golgi | 44.74 | 94.82 |
| Zm00001d040752_P001 | Maize | endoplasmic reticulum, extracellular | 44.74 | 94.82 |
| EES00709 | Sorghum | endoplasmic reticulum, extracellular | 44.74 | 94.82 |
| TraesCS3B01G221700.1 | Wheat | endoplasmic reticulum, extracellular | 44.74 | 94.82 |
| TraesCS5A01G089200.1 | Wheat | golgi | 44.74 | 94.82 |
| KXG23692 | Sorghum | endoplasmic reticulum, extracellular | 44.5 | 94.3 |
| TraesCS3D01G196200.1 | Wheat | endoplasmic reticulum, extracellular | 44.5 | 94.3 |
| TraesCS5D01G101300.1 | Wheat | golgi | 44.5 | 94.3 |
| CDY65544 | Canola | endoplasmic reticulum, extracellular | 44.01 | 94.24 |
| CDY41713 | Canola | endoplasmic reticulum, extracellular | 44.74 | 93.85 |
| CDY59269 | Canola | endoplasmic reticulum, extracellular | 44.74 | 93.85 |
| TraesCS5B01G095200.1 | Wheat | endoplasmic reticulum, extracellular | 44.25 | 93.78 |
| Os01t0338000-01 | Rice | plasma membrane | 44.25 | 93.78 |
| CDY39001 | Canola | endoplasmic reticulum, extracellular | 44.5 | 93.33 |
| Os12t0560300-01 | Rice | plasma membrane | 43.77 | 92.75 |
| Os01t0254000-01 | Rice | plasma membrane | 43.77 | 92.75 |
| Solyc01g100350.2.1 | Tomato | plastid | 43.77 | 92.75 |
| PGSC0003DMT400007183 | Potato | endoplasmic reticulum, golgi | 43.77 | 92.75 |
| KRG92955 | Soybean | endoplasmic reticulum, extracellular | 43.52 | 92.23 |
| KRG96730 | Soybean | endoplasmic reticulum | 43.52 | 92.23 |
| KRH33832 | Soybean | endoplasmic reticulum | 43.52 | 92.23 |
| KRH68446 | Soybean | endoplasmic reticulum | 43.52 | 92.23 |
| EES02699 | Sorghum | endoplasmic reticulum, extracellular | 43.28 | 91.71 |
| Zm00001d040278_P001 | Maize | extracellular | 43.28 | 91.71 |
| TraesCS3B01G203800.1 | Wheat | endoplasmic reticulum | 43.03 | 91.19 |
| TraesCS3A01G172900.1 | Wheat | golgi | 43.03 | 91.19 |
| HORVU3Hr1G035000.2 | Barley | plasma membrane | 43.03 | 91.19 |
| CDY31105 | Canola | endoplasmic reticulum, golgi | 43.03 | 91.19 |
| CDX95000 | Canola | endoplasmic reticulum, golgi | 43.03 | 91.19 |
| CDX93520 | Canola | endoplasmic reticulum, golgi | 43.03 | 91.19 |
| CDY32159 | Canola | endoplasmic reticulum, golgi | 42.79 | 90.67 |
| VIT_16s0013g00170.t01 | Wine grape | cytosol | 23.47 | 88.89 |
| PGSC0003DMT400068658 | Potato | endoplasmic reticulum, extracellular | 41.56 | 88.08 |
| Solyc01g060130.2.1 | Tomato | endoplasmic reticulum, extracellular | 41.32 | 87.56 |
| TraesCS3D01G179300.1 | Wheat | endoplasmic reticulum, extracellular | 43.03 | 87.56 |
| EES15193 | Sorghum | endoplasmic reticulum | 37.16 | 77.95 |
| KXG28257 | Sorghum | endoplasmic reticulum | 36.67 | 77.32 |
| Zm00001d049068_P001 | Maize | cytosol | 36.67 | 77.32 |
| TraesCS7B01G236300.1 | Wheat | cytosol | 36.43 | 77.2 |
| TraesCS7D01G332100.1 | Wheat | endoplasmic reticulum | 36.19 | 76.68 |
| HORVU7Hr1G080190.1 | Barley | endoplasmic reticulum | 36.19 | 76.68 |
| Os06t0225000-00 | Rice | endoplasmic reticulum | 36.19 | 76.29 |
| HORVU3Hr1G045150.3 | Barley | plastid | 37.16 | 68.16 |
| VIT_14s0060g01340.t01 | Wine grape | endoplasmic reticulum, extracellular | 38.63 | 66.67 |
| Zm00001d009211_P001 | Maize | mitochondrion | 44.74 | 55.96 |
| CDY08727 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 15.16 | 33.7 |
| CDY36501 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 15.16 | 33.7 |
| CDY18665 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 14.91 | 33.15 |
| CDY23031 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 14.67 | 32.61 |
| CDY02106 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 14.67 | 32.61 |
| CDX81307 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 14.67 | 32.61 |
| CDY43583 | Canola | cytosol | 5.87 | 31.58 |
| CDY06369 | Canola | cytosol | 13.94 | 31.32 |
| GSMUA_Achr11P... | Banana | mitochondrion, plastid | 16.38 | 27.57 |
| CDY37846 | Canola | cytosol, mitochondrion, nucleus, plastid | 8.56 | 27.34 |
| CDX68554 | Canola | cytosol | 8.07 | 25.58 |
| CDY01716 | Canola | cytosol | 13.45 | 24.44 |
| CDY01715 | Canola | cytosol | 13.45 | 24.44 |
| CDX74569 | Canola | cytosol | 13.45 | 24.34 |
| CDY22028 | Canola | nucleus | 8.56 | 17.07 |
Protein Annotations
| MapMan:22.4.2.1 | Gene3D:3.40.50.300 | GO:A0A078EYD3 | EnsemblPlants:CDY07095 | ProteinID:CDY07095 | ProteinID:CDY07095.1 |
| InterPro:DUF4228_plant | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | EnsemblPlantsGene:GSBRNA2T00123435001 |
| InterPro:IPR006687 | InterPro:P-loop_NTPase | PFAM:PF00025 | PFAM:PF14009 | PRINTS:PR00328 | PFscan:PS51422 |
| PANTHER:PTHR11711 | PANTHER:PTHR11711:SF165 | SMART:SM00177 | SMART:SM00178 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom |
| InterPro:Small_GTPase_ARF/SAR | InterPro:Small_GTPase_SAR1 | TIGRFAMs:TIGR00231 | UniParc:UPI0004EED183 | SEG:seg | : |
Description
BnaCnng01100D
Coordinates
chrLK031975:-:108462..111344
Molecular Weight (calculated)
45530.8 Da
IEP (calculated)
8.993
GRAVY (calculated)
-0.266
Length
409 amino acids
Sequence
(BLAST)
(BLAST)
001: MFMIDWFYGV LASLGLWQKE AKILFLGLDN AGKTTLLHML KDERLVQHQP TQHPTSEELS IGKIKFKAFD LGGHQIARRV WKDYYAKVDA VVYLVDAYDK
101: ERFAESKKEL DALLSDESLA TVPFLILGNK IDIPYAASED ELRYHLGLSN FTTGKGKVNL VDSNVRPLEV FMCSIVRKMG YGEGFKWLSQ YINLHAYDRP
201: GLRMGNAIGS RKLETAAMAA GKVVLSDGRV QNLEEETTVA EIMLENPQHV VVEFDPSSIT FNKDGKTVKK KLTPLPADNT LEPGKIYLVL PAKRSGSGGG
301: AKSSSSSAVM TSEEIRKMLF SATAMVRSSF SYYEGILPWF TTRSYSNSNP AVDAVVAATS VGKLEAETEE EGRPEFLSRQ LSGRGWKPSL DPIKEKNAKK
401: KILHQLLSF
101: ERFAESKKEL DALLSDESLA TVPFLILGNK IDIPYAASED ELRYHLGLSN FTTGKGKVNL VDSNVRPLEV FMCSIVRKMG YGEGFKWLSQ YINLHAYDRP
201: GLRMGNAIGS RKLETAAMAA GKVVLSDGRV QNLEEETTVA EIMLENPQHV VVEFDPSSIT FNKDGKTVKK KLTPLPADNT LEPGKIYLVL PAKRSGSGGG
301: AKSSSSSAVM TSEEIRKMLF SATAMVRSSF SYYEGILPWF TTRSYSNSNP AVDAVVAATS VGKLEAETEE EGRPEFLSRQ LSGRGWKPSL DPIKEKNAKK
401: KILHQLLSF
001: MFMIDWFYGV LASLGLWQKE AKILFLGLDN AGKTTLLHML KDERLVQHQP TQHPTSEELS IGKIKFKAFD LGGHQIARRV WKDYYAKVDA VVYLVDAYDK
101: ERFAESKKEL DALLSDESLA SVPFLILGNK IDIPYAASED ELRYHLGLSN FTTGKGKVNL TDSNVRPLEV FMCSIVRKMG YGEGFKWVSQ YIK
101: ERFAESKKEL DALLSDESLA SVPFLILGNK IDIPYAASED ELRYHLGLSN FTTGKGKVNL TDSNVRPLEV FMCSIVRKMG YGEGFKWVSQ YIK
Arabidopsis Description
SAR1ASAR2 [Source:UniProtKB/TrEMBL;Acc:A0A178V5S8]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.