Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG28257 | Sorghum | endoplasmic reticulum | 93.3 | 93.3 |
| CDY65544 | Canola | endoplasmic reticulum, extracellular | 79.38 | 80.63 |
| Zm00001d040278_P001 | Maize | extracellular | 79.9 | 80.31 |
| Os06t0225000-00 | Rice | endoplasmic reticulum | 79.9 | 79.9 |
| AT3G62560.1 | Thale cress | endoplasmic reticulum | 79.38 | 79.79 |
| AT1G56330.1 | Thale cress | endoplasmic reticulum | 79.38 | 79.79 |
| PGSC0003DMT400018800 | Potato | cytosol | 78.87 | 79.27 |
| Solyc06g009660.2.1 | Tomato | extracellular | 78.87 | 79.27 |
| CDY59269 | Canola | endoplasmic reticulum, extracellular | 79.38 | 78.97 |
| Bra027937.1-P | Field mustard | endoplasmic reticulum, extracellular | 79.38 | 78.97 |
| Bra038169.1-P | Field mustard | endoplasmic reticulum, extracellular | 79.38 | 78.97 |
| CDY41713 | Canola | endoplasmic reticulum, extracellular | 79.38 | 78.97 |
| CDY39001 | Canola | endoplasmic reticulum, extracellular | 79.38 | 78.97 |
| PGSC0003DMT400068658 | Potato | endoplasmic reticulum, extracellular | 78.35 | 78.76 |
| Solyc01g100350.2.1 | Tomato | plastid | 78.35 | 78.76 |
| Solyc01g079540.2.1 | Tomato | plastid | 78.35 | 78.76 |
| VIT_05s0077g01230.t01 | Wine grape | endoplasmic reticulum, extracellular | 78.35 | 78.76 |
| VIT_07s0005g01330.t01 | Wine grape | endoplasmic reticulum, extracellular | 78.35 | 78.76 |
| PGSC0003DMT400023327 | Potato | endoplasmic reticulum, extracellular | 78.35 | 78.76 |
| PGSC0003DMT400007183 | Potato | endoplasmic reticulum, golgi | 78.35 | 78.76 |
| Solyc01g060130.2.1 | Tomato | endoplasmic reticulum, extracellular | 77.84 | 78.24 |
| Zm00001d040752_P001 | Maize | endoplasmic reticulum, extracellular | 77.84 | 78.24 |
| CDY31105 | Canola | endoplasmic reticulum, golgi | 77.32 | 77.72 |
| KRG96730 | Soybean | endoplasmic reticulum | 77.32 | 77.72 |
| CDX95000 | Canola | endoplasmic reticulum, golgi | 77.32 | 77.72 |
| CDX93520 | Canola | endoplasmic reticulum, golgi | 77.32 | 77.72 |
| Bra018576.1-P | Field mustard | endoplasmic reticulum, golgi | 77.32 | 77.72 |
| CDY32159 | Canola | endoplasmic reticulum, golgi | 76.8 | 77.2 |
| KRG92955 | Soybean | endoplasmic reticulum, extracellular | 76.8 | 77.2 |
| CDY22027 | Canola | endoplasmic reticulum, extracellular | 76.8 | 77.2 |
| CDX90955 | Canola | endoplasmic reticulum, extracellular | 76.8 | 77.2 |
| Bra000895.1-P | Field mustard | endoplasmic reticulum, extracellular | 76.8 | 77.2 |
| AT4G02080.1 | Thale cress | endoplasmic reticulum | 76.8 | 77.2 |
| KRH68446 | Soybean | endoplasmic reticulum | 76.8 | 77.2 |
| AT1G09180.1 | Thale cress | extracellular | 76.29 | 76.68 |
| KRH37008 | Soybean | endoplasmic reticulum | 76.29 | 76.68 |
| KRH33832 | Soybean | endoplasmic reticulum | 76.29 | 76.68 |
| KRH11980 | Soybean | endoplasmic reticulum, extracellular | 76.29 | 76.68 |
| CDX91807 | Canola | endoplasmic reticulum, extracellular | 76.29 | 76.68 |
| KRH50759 | Soybean | endoplasmic reticulum | 75.77 | 76.17 |
| KRH02328 | Soybean | endoplasmic reticulum | 75.77 | 76.17 |
| KRH50760 | Soybean | endoplasmic reticulum | 75.77 | 76.17 |
| TraesCS7D01G332100.1 | Wheat | endoplasmic reticulum | 75.26 | 75.65 |
| TraesCS7B01G236300.1 | Wheat | cytosol | 75.26 | 75.65 |
| HORVU7Hr1G080190.1 | Barley | endoplasmic reticulum | 75.26 | 75.65 |
| KRH02329 | Soybean | endoplasmic reticulum, extracellular | 75.26 | 75.65 |
| GSMUA_Achr9P21350_001 | Banana | endoplasmic reticulum, extracellular | 73.71 | 74.09 |
| VIT_16s0013g00170.t01 | Wine grape | cytosol | 39.18 | 70.37 |
| VIT_05s0165g00230.t01 | Wine grape | cytosol | 58.25 | 66.47 |
| AT1G02620.1 | Thale cress | endoplasmic reticulum | 39.69 | 63.11 |
| VIT_14s0060g01340.t01 | Wine grape | endoplasmic reticulum, extracellular | 69.59 | 56.96 |
| Zm00001d009211_P001 | Maize | mitochondrion | 77.84 | 46.18 |
| VIT_02s0033g01130.t01 | Wine grape | cytosol | 37.11 | 40.45 |
| Bra036294.1-P | Field mustard | endoplasmic reticulum | 77.32 | 36.76 |
| CDY07095 | Canola | endoplasmic reticulum | 77.32 | 36.67 |
| Zm00001d028112_P001 | Maize | extracellular | 31.96 | 33.7 |
| Zm00001d048155_P001 | Maize | extracellular | 31.96 | 33.7 |
| Zm00001d017945_P002 | Maize | mitochondrion | 30.93 | 30.77 |
| Zm00001d000379_P002 | Maize | mitochondrion | 32.99 | 28.32 |
Protein Annotations
| EntrezGene:103652863 | MapMan:22.4.2.1 | Gene3D:3.40.50.300 | ProteinID:AQK49518.1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0015031 |
| GO:GO:0016192 | InterPro:IPR006687 | UniProt:K7TVI2 | InterPro:P-loop_NTPase | PFAM:PF00025 | PRINTS:PR00328 |
| PFscan:PS51422 | PANTHER:PTHR11711 | PANTHER:PTHR11711:SF302 | SMART:SM00177 | SMART:SM00178 | SUPFAM:SSF52540 |
| InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase_ARF/SAR | InterPro:Small_GTPase_SAR1 | TIGRFAMs:TIGR00231 | UniParc:UPI000220DFC8 | EnsemblPlantsGene:Zm00001d049068 |
| EnsemblPlants:Zm00001d049068_P001 | EnsemblPlants:Zm00001d049068_T001 | SEG:seg | : | : | : |
Description
GTP-binding protein SAR1B
Coordinates
chr4:+:14627055..14627941
Molecular Weight (calculated)
21551.2 Da
IEP (calculated)
7.500
GRAVY (calculated)
0.020
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLVDWLCDL FVSLRRLWQK EAKILFLGLD NAGKTTLLHM LKDERLSQHA PTQLPTSEEL SIGRIKFKAF DLGGHRIARR VWKDYYAKVD AVVYMVDAAD
101: GGRFDESKTE LGALLSDDAL AGVPFLVLGN KIDIPQAAPE HALAYYLGLT GCTTGKGTVD LAGTGVRPVE VFMCSVVRKM GYGEGFKWMS QYIN
101: GGRFDESKTE LGALLSDDAL AGVPFLVLGN KIDIPQAAPE HALAYYLGLT GCTTGKGTVD LAGTGVRPVE VFMCSVVRKM GYGEGFKWMS QYIN
001: MGPLTRVLIL VEWFSQVDAL VYLVDAYDQE RFAESKKELD ALLSDESLAT VPFLILGNKI DIPYAASEDE LRFHLGLSNF TTGKGKVNLT DSNVRPLEVF
101: MCSIVRKMGY GEGFKWLSQY IK
101: MCSIVRKMGY GEGFKWLSQY IK
Arabidopsis Description
Ras-related small GTP-binding family protein [Source:UniProtKB/TrEMBL;Acc:Q3E6Q3]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.