Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- cytosol 3
- endoplasmic reticulum 6
- extracellular 4
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH33832 | Soybean | endoplasmic reticulum | 98.96 | 98.96 |
| KRH68446 | Soybean | endoplasmic reticulum | 95.34 | 95.34 |
| KRG96730 | Soybean | endoplasmic reticulum | 94.82 | 94.82 |
| CDY22027 | Canola | endoplasmic reticulum, extracellular | 92.75 | 92.75 |
| TraesCS5A01G089200.1 | Wheat | golgi | 92.75 | 92.75 |
| CDX90955 | Canola | endoplasmic reticulum, extracellular | 92.75 | 92.75 |
| Bra000895.1-P | Field mustard | endoplasmic reticulum, extracellular | 92.75 | 92.75 |
| AT1G56330.1 | Thale cress | endoplasmic reticulum | 92.75 | 92.75 |
| TraesCS5D01G101300.1 | Wheat | golgi | 92.23 | 92.23 |
| CDX91807 | Canola | endoplasmic reticulum, extracellular | 92.23 | 92.23 |
| EES00709 | Sorghum | endoplasmic reticulum, extracellular | 92.23 | 92.23 |
| Zm00001d040752_P001 | Maize | endoplasmic reticulum, extracellular | 92.23 | 92.23 |
| TraesCS5B01G095200.1 | Wheat | endoplasmic reticulum, extracellular | 91.71 | 91.71 |
| Os12t0560300-01 | Rice | plasma membrane | 91.71 | 91.71 |
| TraesCS3A01G193800.1 | Wheat | golgi | 91.71 | 91.71 |
| AT4G02080.1 | Thale cress | endoplasmic reticulum | 91.71 | 91.71 |
| KXG23692 | Sorghum | endoplasmic reticulum, extracellular | 91.71 | 91.71 |
| TraesCS3B01G221700.1 | Wheat | endoplasmic reticulum, extracellular | 91.71 | 91.71 |
| CDY65544 | Canola | endoplasmic reticulum, extracellular | 90.67 | 91.62 |
| CDY41713 | Canola | endoplasmic reticulum, extracellular | 92.23 | 91.28 |
| CDY59269 | Canola | endoplasmic reticulum, extracellular | 92.23 | 91.28 |
| Bra027937.1-P | Field mustard | endoplasmic reticulum, extracellular | 92.23 | 91.28 |
| Zm00001d040278_P001 | Maize | extracellular | 91.19 | 91.19 |
| PGSC0003DMT400007183 | Potato | endoplasmic reticulum, golgi | 91.19 | 91.19 |
| Os01t0338000-01 | Rice | plasma membrane | 91.19 | 91.19 |
| TraesCS3D01G196200.1 | Wheat | endoplasmic reticulum, extracellular | 91.19 | 91.19 |
| KRH50759 | Soybean | endoplasmic reticulum | 91.19 | 91.19 |
| KRH37008 | Soybean | endoplasmic reticulum | 91.19 | 91.19 |
| Os01t0254000-01 | Rice | plasma membrane | 91.19 | 91.19 |
| KRH11980 | Soybean | endoplasmic reticulum, extracellular | 91.19 | 91.19 |
| Solyc01g100350.2.1 | Tomato | plastid | 91.19 | 91.19 |
| EES02699 | Sorghum | endoplasmic reticulum, extracellular | 91.19 | 91.19 |
| CDY39001 | Canola | endoplasmic reticulum, extracellular | 91.71 | 90.77 |
| Bra038169.1-P | Field mustard | endoplasmic reticulum, extracellular | 91.71 | 90.77 |
| KRH02329 | Soybean | endoplasmic reticulum, extracellular | 90.67 | 90.67 |
| TraesCS3A01G172900.1 | Wheat | golgi | 90.67 | 90.67 |
| HORVU3Hr1G035000.2 | Barley | plasma membrane | 90.67 | 90.67 |
| Bra018576.1-P | Field mustard | endoplasmic reticulum, golgi | 90.67 | 90.67 |
| TraesCS3B01G203800.1 | Wheat | endoplasmic reticulum | 90.67 | 90.67 |
| KRH50760 | Soybean | endoplasmic reticulum | 90.67 | 90.67 |
| CDY32159 | Canola | endoplasmic reticulum, golgi | 90.67 | 90.67 |
| CDY31105 | Canola | endoplasmic reticulum, golgi | 90.67 | 90.67 |
| CDX95000 | Canola | endoplasmic reticulum, golgi | 90.67 | 90.67 |
| CDX93520 | Canola | endoplasmic reticulum, golgi | 90.67 | 90.67 |
| KRH02328 | Soybean | endoplasmic reticulum | 90.16 | 90.16 |
| AT3G62560.1 | Thale cress | endoplasmic reticulum | 90.16 | 90.16 |
| PGSC0003DMT400068658 | Potato | endoplasmic reticulum, extracellular | 88.6 | 88.6 |
| Solyc01g060130.2.1 | Tomato | endoplasmic reticulum, extracellular | 88.08 | 88.08 |
| AT1G09180.1 | Thale cress | extracellular | 88.08 | 88.08 |
| TraesCS3D01G179300.1 | Wheat | endoplasmic reticulum, extracellular | 90.67 | 87.06 |
| VIT_16s0013g00170.t01 | Wine grape | cytosol | 48.7 | 87.04 |
| AT1G02620.1 | Thale cress | endoplasmic reticulum | 50.26 | 79.51 |
| TraesCS7B01G236300.1 | Wheat | cytosol | 77.72 | 77.72 |
| EES15193 | Sorghum | endoplasmic reticulum | 78.24 | 77.44 |
| Os06t0225000-00 | Rice | endoplasmic reticulum | 77.72 | 77.32 |
| KXG28257 | Sorghum | endoplasmic reticulum | 77.72 | 77.32 |
| TraesCS7D01G332100.1 | Wheat | endoplasmic reticulum | 77.2 | 77.2 |
| HORVU7Hr1G080190.1 | Barley | endoplasmic reticulum | 77.2 | 77.2 |
| Zm00001d049068_P001 | Maize | cytosol | 77.2 | 76.8 |
| HORVU3Hr1G045150.3 | Barley | plastid | 76.17 | 65.92 |
| VIT_14s0060g01340.t01 | Wine grape | endoplasmic reticulum, extracellular | 80.83 | 65.82 |
| Zm00001d009211_P001 | Maize | mitochondrion | 92.23 | 54.43 |
| Bra036294.1-P | Field mustard | endoplasmic reticulum | 92.23 | 43.63 |
| CDY07095 | Canola | endoplasmic reticulum | 92.23 | 43.52 |
| KRG91118 | Soybean | extracellular | 22.8 | 34.92 |
| KRH58117 | Soybean | endoplasmic reticulum | 32.12 | 33.7 |
| KRH77133 | Soybean | endoplasmic reticulum | 31.09 | 32.61 |
| KRH72981 | Soybean | cytosol | 31.09 | 32.61 |
| KRH28350 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 31.09 | 32.61 |
| KRH17349 | Soybean | cytosol | 31.09 | 32.61 |
| GSMUA_Achr11P... | Banana | mitochondrion, plastid | 34.2 | 27.16 |
Protein Annotations
| MapMan:22.4.2.1 | Gene3D:3.40.50.300 | EMBL:ACUP02012773 | EnsemblPlantsGene:GLYMA_20G239600 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0015031 |
| GO:GO:0016192 | UniProt:I1NJ52 | InterPro:IPR006687 | EnsemblPlants:KRG92955 | ProteinID:KRG92955 | ProteinID:KRG92955.1 |
| InterPro:P-loop_NTPase | PFAM:PF00025 | PRINTS:PR00328 | PFscan:PS51422 | PANTHER:PTHR11711 | PANTHER:PTHR11711:SF165 |
| SMART:SM00177 | SMART:SM00178 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase_ARF/SAR | InterPro:Small_GTPase_SAR1 |
| TIGRFAMs:TIGR00231 | UniParc:UPI00023DCC09 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr20:-:47112250..47115079
Molecular Weight (calculated)
22163.8 Da
IEP (calculated)
7.648
GRAVY (calculated)
-0.182
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLFDWFYGI LASLGLWQKE AKILFLGLDN AGKTTLLHML KDERLVQHQP TQYPTSEELS IGRIKFKAFD LGGHQIARRV WKDYYAKVDA VVYLVDAYDK
101: ERFAESKKEL DALLSDESLT TVPFLILGNK IDIPYAASEE ELRYHLGLTN FTTGKGNVNL SDSKVRPMEV FMCSIVKKMG YGDGFKWLSQ YIK
101: ERFAESKKEL DALLSDESLT TVPFLILGNK IDIPYAASEE ELRYHLGLTN FTTGKGNVNL SDSKVRPMEV FMCSIVKKMG YGDGFKWLSQ YIK
001: MFLFDWFYGI LASLGLWQKE AKILFLGLDN AGKTTLLHML KDERLVQHQP TQHPTSEELS IGKIKFKAFD LGGHQIARRV WKDYYAKVDA VVYLVDAYDK
101: ERFAESKREL DALLSDEALA TVPFLILGNK IDIPYAASED ELRYHLGLTN FTTGKGKVTL GDSGVRPLEV FMCSIVRKMG YGEGFKWLSQ YIN
101: ERFAESKREL DALLSDEALA TVPFLILGNK IDIPYAASED ELRYHLGLTN FTTGKGKVTL GDSGVRPLEV FMCSIVRKMG YGEGFKWLSQ YIN
Arabidopsis Description
SAR1BSAR1B [Source:UniProtKB/TrEMBL;Acc:A0A178WM97]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.