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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • peroxisome 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:peroxisome, plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:peroxisome
Predotar:plastid
PProwler:secretory
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG93818
KRH00333
KRH08874
KRH14510
KRH14895
KRH32567
KRH32570
KRH32827
KRH35244
KRH38387
KRH41254
KRH49465
KRH54835
KRH59988
KRH65569
KRH73238
KRH73621
KRH75546
KRH76033

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G40380.1 KRH14510 AT2G30880.1 21798944
AT2G40380.1 KRH73621 AT2G30880.1 21798944
AT2G40380.1 KRG93818 AT2G38360.1 21798944
AT2G40380.1 KRH00333 AT2G38360.1 21798944
AT2G40380.1 KRH32827 AT2G38360.1 21798944
AT2G40380.1 KRH49465 AT2G38360.1 21798944
AT2G40380.1 KRH65569 AT2G38360.1 21798944
AT2G40380.1 KRH76033 AT2G38360.1 21798944
AT2G40380.1 KRH14895 AT2G40380.1 21798944
AT2G40380.1 KRH54835 AT2G40380.1 21798944
AT2G40380.1 KRH73238 AT2G40380.1 21798944
AT2G40380.1 KRH32567 AT3G53180.1 21798944
AT2G40380.1 KRH32570 AT3G53180.1 21798944
AT2G40380.1 KRH75546 AT3G53180.1 21798944
AT2G40380.1 KRH08874 AT4G25660.1 21798944
AT2G40380.1 KRH35244 AT4G25660.1 21798944
AT2G40380.1 KRH38387 AT4G25660.1 21798944
AT2G40380.1 KRH41254 AT5G41600.1 21798944
AT2G40380.1 KRH59988 AT5G41600.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH73238 Soybean plastid 94.88 94.88
KRH54835 Soybean endoplasmic reticulum, extracellular, vacuole 45.12 89.81
Solyc06g050570.1.1 Tomato plastid 76.74 75.69
PGSC0003DMT400061546 Potato plastid 76.28 75.23
AT3G56110.1 Thale cress plastid 66.51 68.42
Bra003228.1-P Field mustard plastid 66.51 67.77
CDX67633 Canola plastid 66.51 67.77
CDY31997 Canola plastid 65.58 67.14
CDX72173 Canola plastid 63.26 67.0
Bra007216.1-P Field mustard plastid 62.33 66.01
CDY27245 Canola plastid 62.33 66.01
CDX74794 Canola plastid 63.72 64.32
CDY18870 Canola plastid 62.33 64.11
Bra004965.1-P Field mustard plastid 63.26 63.85
CDX70153 Canola plastid 63.26 63.26
AT2G40380.1 Thale cress plastid 62.33 62.91
Bra009110.1-P Field mustard plastid 62.79 62.79
KRH76033 Soybean endoplasmic reticulum 63.72 62.56
KRH65569 Soybean plastid 65.12 61.67
Bra017037.1-P Field mustard plastid 24.19 60.47
CDY05662 Canola plastid 20.47 60.27
Bra007796.1-P Field mustard plastid 23.72 59.3
CDY25186 Canola plastid 23.72 59.3
CDY41253 Canola plastid 23.26 58.14
KRG93818 Soybean extracellular, plasma membrane, vacuole 20.47 52.38
AT5G05380.2 Thale cress plasma membrane 66.05 50.0
KRH32827 Soybean plastid 51.16 48.67
KRH00333 Soybean plastid 51.16 48.46
KRH49465 Soybean plastid 49.3 47.53
KRH44167 Soybean plasma membrane 33.02 40.34
KRH47141 Soybean plasma membrane 32.09 38.76
KRH71325 Soybean plastid 31.63 38.42
KRG95630 Soybean plastid 35.35 38.0
KRH32112 Soybean plastid 32.09 37.5
KRH10001 Soybean mitochondrion 31.16 36.41
KRH23330 Soybean plastid 30.7 35.87
KRH67312 Soybean plastid 33.02 35.32
KRG92690 Soybean plastid 30.7 34.38
KRH34097 Soybean plastid 29.3 33.16
KRH04803 Soybean plastid 14.42 31.63
KRH34380 Soybean cytosol, plastid 23.72 30.18
KRH74153 Soybean endoplasmic reticulum, peroxisome, plasma membrane 25.12 27.0
KRH49060 Soybean plasma membrane 23.72 25.76
Protein Annotations
EMBL:ACUP02008540EnsemblPlants:KRH14895EnsemblPlantsGene:GLYMA_14G055500EntrezGene:100778374GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021InterPro:Prenylated_rab_accept_PRA1PANTHER:PTHR19317PANTHER:PTHR19317:SF34
PFAM:PF03208ProteinID:KRH14895ProteinID:KRH14895.1SEG:segTMHMM:TMhelixUniParc:UPI000233B2BB
UniProt:A0A0R0GL62MapMan:22.8.4.3.2::::
Description
hypothetical protein
Coordinates
chr14:+:4411949..4413885
Molecular Weight (calculated)
23150.1 Da
IEP (calculated)
10.041
GRAVY (calculated)
0.566
Length
215 amino acids
Sequence
(BLAST)
001: MASPSSLPIS SQSSASAAGA SQSQPPIATP AFRAFISRIS SSLRHAFAQR RPWTELIDRS SMSRPDTLAE AYSRIRKNFA YFRVNYLTLI VLALAVSLIS
101: HPFSLFVLFG LLASWSFLYL FRPSDQPVVL FGRTFADRET LGILVVLTVF VIFLTSVGSL LISALMVGLA IVCAHGAFRV PEDLFLDDQE PNSSGFLSFL
201: GGAAASAAAP AVARV
Best Arabidopsis Sequence Match ( AT3G56110.4 )
(BLAST)
001: MATPPTLPVT NQQAVQSQPP INTPAFRTFF SRLSTSIRDG LSQRRPWTEL IDRSSMARPE SLTDALSRIR KNLAYFKVNY VAIVSLVLAF SLFSHPLSLL
101: VLIGLLGGWM FLYLFRPSDQ PLVVFGRTFS DRETLLALVL STIVVVFMTS VGSLLTSALM IGVAIVCVHG AFVVPDDLFL DEQEPANAGL LSFLGGSATS
201: AAAAVSGRV
Arabidopsis Description
PRA1B1PRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VNJ7]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.