Factsheet for Bra017037.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007796.1-P	Field mustard	plastid	98.84	98.84
CDY25186	Canola	plastid	97.67	97.67
Bra003228.1-P	Field mustard	plastid	94.19	38.39
Bra007216.1-P	Field mustard	plastid	88.37	37.44
AT3G56110.1	Thale cress	plastid	90.7	37.32
Bra004965.1-P	Field mustard	plastid	75.58	30.52
KRH73238	Soybean	plastid	61.63	24.65
KRH14895	Soybean	plastid	60.47	24.19
Bra009110.1-P	Field mustard	plastid	59.3	23.72
Solyc06g050570.1.1	Tomato	plastid	58.14	22.94
PGSC0003DMT400061546	Potato	plastid	58.14	22.94
Bra000056.1-P	Field mustard	plastid	58.14	22.52
Bra005924.1-P	Field mustard	plastid	44.19	17.43
Bra027406.1-P	Field mustard	plasma membrane	36.05	17.13
Bra021504.1-P	Field mustard	endoplasmic reticulum, peroxisome, plasma membrane	31.4	14.84
Bra014355.1-P	Field mustard	cytosol, plasma membrane, plastid	30.23	13.76
Bra002833.1-P	Field mustard	plastid	29.07	13.51
Bra038009.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	29.07	13.44
Bra011125.1-P	Field mustard	mitochondrion	26.74	13.14
Bra025954.1-P	Field mustard	plasma membrane	25.58	11.96
Bra031001.1-P	Field mustard	plasma membrane	24.42	11.6
Bra018602.1-P	Field mustard	plastid	26.74	11.06
Bra021502.1-P	Field mustard	plastid	26.74	10.75
Bra037983.1-P	Field mustard	extracellular, plasma membrane	17.44	10.71
Bra030561.1-P	Field mustard	plasma membrane	20.93	10.11
Bra021503.1-P	Field mustard	plastid	24.42	10.1
Bra005112.1-P	Field mustard	plastid	15.12	7.74
KRH54835	Soybean	endoplasmic reticulum, extracellular, vacuole	0.0	0.0

Protein Annotations

EnsemblPlants:Bra017037.1	EnsemblPlants:Bra017037.1-P	EnsemblPlantsGene:Bra017037	GO:GO:0005575	GO:GO:0016020	InterPro:Prenylated_rab_accept_PRA1
PANTHER:PTHR19317	PANTHER:PTHR19317:SF34	PFAM:PF03208	UniParc:UPI0002544D75	UniProt:M4DKK6	MapMan:35.1

Description

AT3G56110 (E=7e-041) PRA1.B1 | PRA1.B1 (PRENYLATED RAB ACCEPTOR 1.B1)

Coordinates

chrA04:-:16998206..16998466

Molecular Weight (calculated)

9728.7 Da

IEP (calculated)

11.359

GRAVY (calculated)

-0.272

Length

86 amino acids

Sequence
(BLAST)

1: MSTPPLLPVT NQQAVQSQPP INTPAFHTFF SRLSTSIRDG LSQRRPWAEL VDRSSMARPE SLTDALSRIR KNLAYFKVNY VAVIQL

Best Arabidopsis Sequence Match ( AT3G56110.1 )
(BLAST)

001: MATPPTLPVT NQQAVQSQPP INTPAFRTFF SRLSTSIRDG LSQRRPWTEL IDRSSMARPE SLTDALSRIR KNLAYFKVNY VAIVSLVLAF SLFSHPLSLL
101: VLIGLLGGWM FLYLFRPSDQ PLVVFGRTFS DRETLLALVL STIVVVFMTS VGSLLTSALM IGVAIVCVHG AFVVPDDLFL DEQEPANAGL LSFLGGSATS
201: AAAAVSGRV

Arabidopsis Description

PRA1B1PRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VNJ7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.