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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 6
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG93818
KRH00333
KRH08874
KRH14510
KRH14895
KRH32567
KRH32570
KRH32827
KRH35244
KRH38387
KRH41254
KRH49465
KRH54835
KRH59988
KRH65569
KRH73238
KRH73621
KRH75546
KRH76033

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G40380.1 KRH14510 AT2G30880.1 21798944
AT2G40380.1 KRH73621 AT2G30880.1 21798944
AT2G40380.1 KRG93818 AT2G38360.1 21798944
AT2G40380.1 KRH00333 AT2G38360.1 21798944
AT2G40380.1 KRH32827 AT2G38360.1 21798944
AT2G40380.1 KRH49465 AT2G38360.1 21798944
AT2G40380.1 KRH65569 AT2G38360.1 21798944
AT2G40380.1 KRH76033 AT2G38360.1 21798944
AT2G40380.1 KRH14895 AT2G40380.1 21798944
AT2G40380.1 KRH54835 AT2G40380.1 21798944
AT2G40380.1 KRH73238 AT2G40380.1 21798944
AT2G40380.1 KRH32567 AT3G53180.1 21798944
AT2G40380.1 KRH32570 AT3G53180.1 21798944
AT2G40380.1 KRH75546 AT3G53180.1 21798944
AT2G40380.1 KRH08874 AT4G25660.1 21798944
AT2G40380.1 KRH35244 AT4G25660.1 21798944
AT2G40380.1 KRH38387 AT4G25660.1 21798944
AT2G40380.1 KRH41254 AT5G41600.1 21798944
AT2G40380.1 KRH59988 AT5G41600.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH14895 Soybean plastid 89.81 45.12
KRH73238 Soybean plastid 88.89 44.65
Solyc06g050570.1.1 Tomato plastid 76.85 38.07
PGSC0003DMT400061546 Potato plastid 76.85 38.07
Bra003228.1-P Field mustard plastid 70.37 36.02
CDX67633 Canola plastid 69.44 35.55
CDY31997 Canola plastid 68.52 35.24
AT3G56110.1 Thale cress plastid 67.59 34.93
CDX72173 Canola plastid 62.04 33.0
Bra007216.1-P Field mustard plastid 62.04 33.0
CDY27245 Canola plastid 62.04 33.0
KRH76033 Soybean endoplasmic reticulum 66.67 32.88
KRH65569 Soybean plastid 67.59 32.16
Bra009110.1-P Field mustard plastid 63.89 32.09
CDX70153 Canola plastid 63.89 32.09
CDY18870 Canola plastid 61.11 31.58
AT2G40380.1 Thale cress plastid 62.04 31.46
CDX74794 Canola plastid 61.11 30.99
Bra004965.1-P Field mustard plastid 60.19 30.52
KRG93818 Soybean extracellular, plasma membrane, vacuole 20.37 26.19
AT5G05380.2 Thale cress plasma membrane 67.59 25.7
KRH32827 Soybean plastid 52.78 25.22
KRH00333 Soybean plastid 50.93 24.23
KRH49465 Soybean plastid 48.15 23.32
KRH44167 Soybean plasma membrane 32.41 19.89
KRH47141 Soybean plasma membrane 32.41 19.66
KRH71325 Soybean plastid 30.56 18.64
KRH10001 Soybean mitochondrion 31.48 18.48
KRH23330 Soybean plastid 31.48 18.48
KRH32112 Soybean plastid 30.56 17.93
KRG95630 Soybean plastid 32.41 17.5
KRH34097 Soybean plastid 30.56 17.37
KRG92690 Soybean plastid 30.56 17.19
KRH67312 Soybean plastid 29.63 15.92
KRH34380 Soybean cytosol, plastid 22.22 14.2
KRH74153 Soybean endoplasmic reticulum, peroxisome, plasma membrane 25.0 13.5
KRH49060 Soybean plasma membrane 24.07 13.13
KRH04803 Soybean plastid 6.48 7.14
Bra007796.1-P Field mustard plastid 0.0 0.0
CDY41253 Canola plastid 0.0 0.0
Bra017037.1-P Field mustard plastid 0.0 0.0
CDY05662 Canola plastid 0.0 0.0
CDY25186 Canola plastid 0.0 0.0
Protein Annotations
EMBL:ACUP02003588EnsemblPlants:KRH54835EnsemblPlantsGene:GLYMA_06G212600EntrezGene:100786904GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021InterPro:Prenylated_rab_accept_PRA1PANTHER:PTHR19317PANTHER:PTHR19317:SF34
PFAM:PF03208ProteinID:KRH54835ProteinID:KRH54835.1SEG:segTMHMM:TMhelixUniParc:UPI000295DFF5
UniProt:K7KWF3MapMan:22.8.4.3.2::::
Description
hypothetical protein
Coordinates
chr6:-:21386538..21386864
Molecular Weight (calculated)
11509.2 Da
IEP (calculated)
4.166
GRAVY (calculated)
1.149
Length
108 amino acids
Sequence
(BLAST)
001: MLALSLITHS FSLFVLFGLL ASWSFLYLFL PSDQPVVLFE RTFVILLTSV GSLLISALMV GLAIVCAYGA FRVPEDLFLD DQEPNSSGFL SFLGSAATSA
101: AAAAVARV
Best Arabidopsis Sequence Match ( AT2G38360.1 )
(BLAST)
001: MASSAPPVLP ISNPQTVPSA APSSVESQPP IATPAFRNFI NQITETVKNG LSKRRPWAEL ADRSALSKPE SISDAAVRIR KNYSYFKVNY LTVATAIVGF
101: SLVTHPFSLV FLLCLLASWL FLYLFRPTDQ PIVLFGRTFS DRETLGCLIL FSIFVIFLTD VGSVLVSAMM IGVALICAHG AFRAPEDLFL DEQEPAATGF
201: LSFLGGAASS AAPAVIAARV
Arabidopsis Description
PRA1B4PRA1 family protein B4 [Source:UniProtKB/Swiss-Prot;Acc:O80915]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.