CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017037.1-P	Field mustard	plastid	97.67	97.67
CDY05662	Canola	plastid	80.23	94.52
CDY41253	Canola	plastid	94.19	94.19
CDY31997	Canola	plastid	93.02	38.1
CDX67633	Canola	plastid	91.86	37.44
CDY27245	Canola	plastid	86.05	36.45
AT3G56110.1	Thale cress	plastid	88.37	36.36
CDX72173	Canola	plastid	83.72	35.47
CDY61529	Canola	plastid	46.51	31.75
CDX74794	Canola	plastid	74.42	30.05
CDY18870	Canola	plastid	70.93	29.19
KRH73238	Soybean	plastid	59.3	23.72
KRH14895	Soybean	plastid	59.3	23.72
CDX70153	Canola	plastid	58.14	23.26
Solyc06g050570.1.1	Tomato	plastid	56.98	22.48
PGSC0003DMT400061546	Potato	plastid	56.98	22.48
CDY63156	Canola	plastid	53.49	21.1
CDY07736	Canola	plastid	53.49	20.72
CDX80758	Canola	plastid	46.51	18.69
CDY23634	Canola	plasma membrane	34.88	16.57
CDX97509	Canola	plasma membrane	34.88	16.57
CDY58876	Canola	plastid	41.86	16.51
CDX81033	Canola	plastid	41.86	16.51
CDY33064	Canola	cytosol, plasma membrane, plastid	34.88	16.04
CDY24050	Canola	cytosol, plasma membrane, plastid	33.72	15.51
CDY37483	Canola	plasma membrane	32.56	15.38
CDY51735	Canola	plasma membrane	32.56	15.38
CDY26125	Canola	cytosol, plasma membrane, plastid	30.23	13.76
CDY08228	Canola	plasma membrane	30.23	13.76
CDY51077	Canola	cytosol, endoplasmic reticulum, plasma membrane	29.07	13.51
CDY50022	Canola	cytosol, endoplasmic reticulum, plasma membrane	29.07	13.44
CDY06788	Canola	plastid	29.07	12.89
CDY32804	Canola	plastid	27.91	12.77
CDY43514	Canola	mitochondrion	25.58	12.57
CDX81845	Canola	plasma membrane	24.42	11.6
CDY17405	Canola	plastid	25.58	11.46
CDY26225	Canola	plasma membrane	24.42	11.41
CDY37482	Canola	plastid	26.74	11.0
CDY51733	Canola	plastid	26.74	10.75
CDY51734	Canola	plastid	25.58	10.53
CDY55133	Canola	plasma membrane	25.58	10.33
CDY59501	Canola	plasma membrane	22.09	10.33
CDY15494	Canola	plasma membrane	20.93	10.11
CDX86646	Canola	plasma membrane	20.93	10.11
CDX95035	Canola	plastid	24.42	10.1
CDX93539	Canola	plastid	24.42	10.1
CDY54457	Canola	endoplasmic reticulum, peroxisome, plasma membrane	18.6	8.79
KRH54835	Soybean	endoplasmic reticulum, extracellular, vacuole	0.0	0.0

Protein Annotations

EnsemblPlants:CDY25186	EnsemblPlantsGene:GSBRNA2T00029134001	GO:GO:0005575	GO:GO:0016020	InterPro:Prenylated_rab_accept_PRA1	PANTHER:PTHR19317
PANTHER:PTHR19317:SF34	PFAM:PF03208	ProteinID:CDY25186	ProteinID:CDY25186.1	UniParc:UPI0004EF3BC0	UniProt:A0A078GII3
MapMan:35.1	:	:	:	:	:

Description

BnaC06g04110DPRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A078GII3]

Coordinates

chrLK032170:-:225467..226309

Molecular Weight (calculated)

9691.7 Da

IEP (calculated)

10.433

GRAVY (calculated)

-0.128

Length

86 amino acids

Sequence
(BLAST)

1: MSTPLLLPVT NQQAVQSQPP INTPAFHTFF SCLSTSIRDG LSQRRPWAEL VDRSSMARPE SLTDALSRIR KNLAYFKVNY VAVIQL

Best Arabidopsis Sequence Match ( AT3G56110.1 )
(BLAST)

001: MATPPTLPVT NQQAVQSQPP INTPAFRTFF SRLSTSIRDG LSQRRPWTEL IDRSSMARPE SLTDALSRIR KNLAYFKVNY VAIVSLVLAF SLFSHPLSLL
101: VLIGLLGGWM FLYLFRPSDQ PLVVFGRTFS DRETLLALVL STIVVVFMTS VGSLLTSALM IGVAIVCVHG AFVVPDDLFL DEQEPANAGL LSFLGGSATS
201: AAAAVSGRV

Arabidopsis Description

PRA1B1PRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VNJ7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.