Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY32804 | Canola | plastid | 91.67 | 93.62 |
| AT5G56230.1 | Thale cress | plasma membrane, plastid | 72.4 | 74.73 |
| PGSC0003DMT400056954 | Potato | plasma membrane | 42.71 | 43.85 |
| Solyc07g066190.1.1 | Tomato | plasma membrane, plastid | 43.75 | 43.52 |
| CDY51077 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 39.58 | 41.08 |
| CDY50022 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 38.54 | 39.78 |
| CDY24050 | Canola | cytosol, plasma membrane, plastid | 28.12 | 28.88 |
| CDY05662 | Canola | plastid | 10.94 | 28.77 |
| CDY33064 | Canola | cytosol, plasma membrane, plastid | 27.6 | 28.34 |
| CDX80758 | Canola | plastid | 31.25 | 28.04 |
| CDX93539 | Canola | plastid | 30.21 | 27.88 |
| CDY61529 | Canola | plastid | 18.23 | 27.78 |
| CDY23634 | Canola | plasma membrane | 26.04 | 27.62 |
| CDY27245 | Canola | plastid | 29.17 | 27.59 |
| CDX72173 | Canola | plastid | 29.17 | 27.59 |
| CDX95035 | Canola | plastid | 29.69 | 27.4 |
| CDY18870 | Canola | plastid | 29.69 | 27.27 |
| CDY26225 | Canola | plasma membrane | 26.04 | 27.17 |
| CDY63156 | Canola | plastid | 30.73 | 27.06 |
| CDY58876 | Canola | plastid | 30.73 | 27.06 |
| CDY07736 | Canola | plastid | 31.25 | 27.03 |
| CDX67633 | Canola | plastid | 29.69 | 27.01 |
| CDY08228 | Canola | plasma membrane | 26.56 | 26.98 |
| CDY26125 | Canola | cytosol, plasma membrane, plastid | 26.56 | 26.98 |
| CDY51735 | Canola | plasma membrane | 25.52 | 26.92 |
| CDY31997 | Canola | plastid | 29.17 | 26.67 |
| CDY59501 | Canola | plasma membrane | 25.52 | 26.63 |
| CDX81033 | Canola | plastid | 30.21 | 26.61 |
| CDX97509 | Canola | plasma membrane | 25.0 | 26.52 |
| CDX81845 | Canola | plasma membrane | 25.0 | 26.52 |
| CDY15494 | Canola | plasma membrane | 24.48 | 26.4 |
| CDX86646 | Canola | plasma membrane | 24.48 | 26.4 |
| CDY37483 | Canola | plasma membrane | 25.0 | 26.37 |
| CDY06788 | Canola | plastid | 26.56 | 26.29 |
| CDX74794 | Canola | plastid | 28.65 | 25.82 |
| CDY25186 | Canola | plastid | 11.46 | 25.58 |
| CDX70153 | Canola | plastid | 28.65 | 25.58 |
| CDY43514 | Canola | mitochondrion | 22.92 | 25.14 |
| CDY41253 | Canola | plastid | 10.94 | 24.42 |
| CDY54457 | Canola | endoplasmic reticulum, peroxisome, plasma membrane | 21.88 | 23.08 |
| CDY37482 | Canola | plastid | 22.4 | 20.57 |
| CDY51733 | Canola | plastid | 22.4 | 20.09 |
| CDY51734 | Canola | plastid | 21.35 | 19.62 |
| CDY55133 | Canola | plasma membrane | 21.35 | 19.25 |
Protein Annotations
| EnsemblPlants:CDY17405 | EnsemblPlantsGene:GSBRNA2T00095521001 | GO:A0A078FSA0 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Prenylated_rab_accept_PRA1 | PANTHER:PTHR19317 | PANTHER:PTHR19317:SF11 | PFAM:PF03208 | ProteinID:CDY17405 | ProteinID:CDY17405.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EB4EB0 | UniProt:A0A078FSA0 | MapMan:22.8.4.3.2 | : |
Description
BnaA10g10390DPRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A078FSA0]
Coordinates
chrLK032072:-:740535..741197
Molecular Weight (calculated)
21048.6 Da
IEP (calculated)
7.455
GRAVY (calculated)
0.620
Length
192 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPTITTTTT TMAPTYTSIP IPTGDVISRS IHNLTSAISR HRPWSELVFS GAFCFPERFS SLPLRSRSNF RYFSVNYSLI IGTCAAFSLV TASPVALVVV
101: GTIIALWLLL HFFREDPLLL WGFQVGDRMV VCFLVLASVW ALWFTSSAVS LAVGVSVGLL LCTVHSLIRN SDELFLEEDD AITGGLIGSN RR
101: GTIIALWLLL HFFREDPLLL WGFQVGDRMV VCFLVLASVW ALWFTSSAVS LAVGVSVGLL LCTVHSLIRN SDELFLEEDD AITGGLIGSN RR
001: MTPSPPPITY ISIPLPTNDV VSRSIHNLTT AISSHRPWSE LIFSGDFSLP ESFSSLLLRS KTNFNYFFVN YTIIVSTCAA FALITASPVA LIVVGAIIAL
101: WLIFHFFRED PLILWSFQVG DRTVLLFLVL ASVWAIWFTN SAVNLAVGVS VGLLLCIIHA VFRNSDELFL EEDDAINGGL IGSNLR
101: WLIFHFFRED PLILWSFQVG DRTVLLFLVL ASVWAIWFTN SAVNLAVGVS VGLLLCIIHA VFRNSDELFL EEDDAINGGL IGSNLR
Arabidopsis Description
PRA1G2PRA1 family protein G2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH16]
SUBAcon: [plasma membrane,plastid]
SUBAcon: [plasma membrane,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.