CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plasma membrane, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025954.1-P	Field mustard	plasma membrane	98.37	98.37
CDY59501	Canola	plasma membrane	94.57	94.57
CDX81845	Canola	plasma membrane	82.61	83.98
AT1G17700.1	Thale cress	plasma membrane	76.63	78.33
PGSC0003DMT400006409	Potato	plasma membrane	48.91	49.45
KRH47141	Soybean	plasma membrane	47.83	49.44
KRH10001	Soybean	mitochondrion	48.37	48.37
KRH44167	Soybean	plasma membrane	45.65	47.73
VIT_09s0002g02400.t01	Wine grape	plastid	50.0	47.67
CDY33064	Canola	cytosol, plasma membrane, plastid	48.37	47.59
KRH23330	Soybean	plastid	47.28	47.28
Solyc03g121460.1.1	Tomato	plastid	46.74	47.25
CDY24050	Canola	cytosol, plasma membrane, plastid	47.83	47.06
CDX97509	Canola	plasma membrane	44.57	45.3
CDY23634	Canola	plasma membrane	44.57	45.3
CDY51735	Canola	plasma membrane	44.02	44.51
CDY37483	Canola	plasma membrane	43.48	43.96
CDY08228	Canola	plasma membrane	45.11	43.92
CDY26125	Canola	cytosol, plasma membrane, plastid	44.57	43.39
GSMUA_Achr7P09070_001	Banana	plastid	44.02	43.09
TraesCS1B01G143000.1	Wheat	plastid	41.3	39.58
Os05t0200280-01	Rice	plasma membrane	41.3	39.38
TraesCS1D01G130300.1	Wheat	plastid	40.76	39.27
TraesCS1A01G124100.1	Wheat	plastid	40.22	38.74
TraesCS3B01G122600.1	Wheat	plastid	38.59	37.37
TraesCS3D01G106500.1	Wheat	plastid	38.59	37.37
Zm00001d039455_P002	Maize	extracellular, mitochondrion	39.13	37.31
EES00126	Sorghum	plastid	38.59	36.98
TraesCS3A01G104300.1	Wheat	plastid	38.04	36.65
Os01t0196500-01	Rice	plastid	39.13	35.82
OQU77594	Sorghum	plastid	37.5	35.2
Zm00001d037747_P001	Maize	plastid	35.87	35.11
HORVU1Hr1G028520.1	Barley	plastid	40.22	34.26
CDY15494	Canola	plasma membrane	31.52	32.58
CDX86646	Canola	plasma membrane	31.52	32.58
CDY06788	Canola	plastid	32.61	30.93
CDY43514	Canola	mitochondrion	29.35	30.86
CDX70153	Canola	plastid	35.33	30.23
CDY18870	Canola	plastid	34.24	30.14
CDX74794	Canola	plastid	34.78	30.05
CDX95035	Canola	plastid	32.61	28.85
CDY54457	Canola	endoplasmic reticulum, peroxisome, plasma membrane	27.72	28.02
CDX93539	Canola	plastid	31.52	27.88
CDY32804	Canola	plastid	28.26	27.66
CDY27245	Canola	plastid	30.43	27.59
CDX72173	Canola	plastid	30.43	27.59
CDY51077	Canola	cytosol, endoplasmic reticulum, plasma membrane	27.72	27.57
CDY63156	Canola	plastid	32.61	27.52
CDX67633	Canola	plastid	31.52	27.49
CDY07736	Canola	plastid	33.15	27.48
HORVU3Hr1G018940.2	Barley	plastid	38.04	27.45
CDY31997	Canola	plastid	30.98	27.14
CDY61529	Canola	plastid	18.48	26.98
CDY50022	Canola	cytosol, endoplasmic reticulum, plasma membrane	27.17	26.88
CDY51733	Canola	plastid	30.98	26.64
CDY17405	Canola	plastid	27.17	26.04
CDY05662	Canola	plastid	10.33	26.03
CDY51734	Canola	plastid	29.35	25.84
CDY41253	Canola	plastid	11.96	25.58
CDY37482	Canola	plastid	28.8	25.36
CDY55133	Canola	plasma membrane	29.35	25.35
CDX80758	Canola	plastid	28.8	24.77
CDY25186	Canola	plastid	11.41	24.42
CDX81033	Canola	plastid	28.26	23.85
CDY58876	Canola	plastid	27.72	23.39

Protein Annotations

EnsemblPlants:CDY26225	EnsemblPlantsGene:GSBRNA2T00034894001	GO:A0A078GID3	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Prenylated_rab_accept_PRA1	PANTHER:PTHR19317	PANTHER:PTHR19317:SF2	PFAM:PF03208	ProteinID:CDY26225	ProteinID:CDY26225.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EE386A	UniProt:A0A078GID3	MapMan:22.8.4.3.2	:

Description

BnaA06g11920DPRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A078GID3]

Coordinates

chrLK032186:-:406092..406646

Molecular Weight (calculated)

20998.0 Da

IEP (calculated)

9.966

GRAVY (calculated)

0.395

Length

184 amino acids

Sequence
(BLAST)

001: MTTIYGTNPT AANDQAPKLE YITRTNNQHH VRPGLATRRP WKQMLDLRSF HFPRKIASVI TRIKTNIVYF QTNYTIVVLF SVFLSLIWKP FALLILLALI
101: GAWLFLYFLR DEPLTVFDRE IDHRVVLIVM SALTLSVLFL TDAKLNIAVA VVVGVVVVLL HAAVRKTEEI NQNEDETSPL LPQV

Best Arabidopsis Sequence Match ( AT1G17700.1 )
(BLAST)

001: MTTYGTNQKS SNDLAPKLEY ITRGINQHKR SGLATRRPWK QMLDLGSFNF PRKLATVITR IRANTVYFQT NYTIVVLFSV FLSLIWNPFS LLVLLALLGA
101: WLFLYFLRDE PLTVFDREID HRIVLIIMSV ITLSILFLTD AKLNIAVAIV AGALAVLSHA AVRKTEDLFQ TDEETSLLNP

Arabidopsis Description

PRA1F1PRA1 family protein F1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.