Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038009.1-P | Field mustard | cytosol, endoplasmic reticulum, plasma membrane | 98.92 | 98.92 |
| CDY51077 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 96.24 | 96.76 |
| AT1G55640.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 66.13 | 65.78 |
| CDY32804 | Canola | plastid | 40.32 | 39.89 |
| CDY17405 | Canola | plastid | 39.78 | 38.54 |
| PGSC0003DMT400056954 | Potato | plasma membrane | 37.63 | 37.43 |
| Solyc07g066190.1.1 | Tomato | plasma membrane, plastid | 38.71 | 37.31 |
| CDY33064 | Canola | cytosol, plasma membrane, plastid | 31.72 | 31.55 |
| CDY23634 | Canola | plasma membrane | 30.65 | 31.49 |
| CDY26125 | Canola | cytosol, plasma membrane, plastid | 31.72 | 31.22 |
| CDY24050 | Canola | cytosol, plasma membrane, plastid | 31.18 | 31.02 |
| CDY43514 | Canola | mitochondrion | 29.03 | 30.86 |
| CDY51735 | Canola | plasma membrane | 30.11 | 30.77 |
| CDY08228 | Canola | plasma membrane | 31.18 | 30.69 |
| CDY06788 | Canola | plastid | 31.72 | 30.41 |
| CDY37483 | Canola | plasma membrane | 29.57 | 30.22 |
| CDX97509 | Canola | plasma membrane | 29.03 | 29.83 |
| CDY41253 | Canola | plastid | 13.44 | 29.07 |
| CDY25186 | Canola | plastid | 13.44 | 29.07 |
| CDY05662 | Canola | plastid | 11.29 | 28.77 |
| CDX81845 | Canola | plasma membrane | 27.42 | 28.18 |
| CDX86646 | Canola | plasma membrane | 26.88 | 28.09 |
| CDY61529 | Canola | plastid | 18.82 | 27.78 |
| CDY59501 | Canola | plasma membrane | 27.42 | 27.72 |
| CDY15494 | Canola | plasma membrane | 26.34 | 27.53 |
| CDY18870 | Canola | plastid | 30.65 | 27.27 |
| CDY26225 | Canola | plasma membrane | 26.88 | 27.17 |
| CDX74794 | Canola | plastid | 30.65 | 26.76 |
| CDY63156 | Canola | plastid | 31.18 | 26.61 |
| CDY27245 | Canola | plastid | 29.03 | 26.6 |
| CDX72173 | Canola | plastid | 29.03 | 26.6 |
| CDY07736 | Canola | plastid | 31.18 | 26.13 |
| CDY31997 | Canola | plastid | 29.03 | 25.71 |
| CDX81033 | Canola | plastid | 30.11 | 25.69 |
| CDY58876 | Canola | plastid | 30.11 | 25.69 |
| CDX67633 | Canola | plastid | 29.03 | 25.59 |
| CDY54457 | Canola | endoplasmic reticulum, peroxisome, plasma membrane | 24.73 | 25.27 |
| CDX70153 | Canola | plastid | 29.03 | 25.12 |
| CDX80758 | Canola | plastid | 28.49 | 24.77 |
| CDX93539 | Canola | plastid | 25.81 | 23.08 |
| CDX95035 | Canola | plastid | 25.27 | 22.6 |
| CDY55133 | Canola | plasma membrane | 24.19 | 21.13 |
| CDY51733 | Canola | plastid | 24.19 | 21.03 |
| CDY37482 | Canola | plastid | 22.58 | 20.1 |
| CDY51734 | Canola | plastid | 20.97 | 18.66 |
Protein Annotations
| EnsemblPlants:CDY50022 | EnsemblPlantsGene:GSBRNA2T00095769001 | GO:A0A078IJG0 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Prenylated_rab_accept_PRA1 | PANTHER:PTHR19317 | PANTHER:PTHR19317:SF11 | PFAM:PF03208 | ProteinID:CDY50022 | ProteinID:CDY50022.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EE3938 | UniProt:A0A078IJG0 | MapMan:22.8.4.3.2 | : |
Description
BnaA06g00230DPRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A078IJG0]
Coordinates
chrLK032875:-:27789..28349
Molecular Weight (calculated)
20885.7 Da
IEP (calculated)
6.500
GRAVY (calculated)
0.730
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPPENILPI TAEERHHSFG EVISLSVQNL IAFVSSQRPW LEFLALGSMD LPTSFSSAVS RSKVNLRHFV VNYSLITAAS ITLFLVSNPT ALVTLATFAI
101: LWLLLCFCRD HPLVLYGRQV SEKVIFFGLI VGSFWGFWLT HCFFSLVLGV LTGVLLCLVH AVLRNPDDLF VQEEEVVVPS HFLHWS
101: LWLLLCFCRD HPLVLYGRQV SEKVIFFGLI VGSFWGFWLT HCFFSLVLGV LTGVLLCLVH AVLRNPDDLF VQEEEVVVPS HFLHWS
001: MLAPGESVLI PAEEISLSAG DVISLSVHNL IASVSSYRPW WSEFLAFGSI DRPSSFSPAV SRVKLNLHHF AVNYVLLTAA SITLFLIGDP MALVTVASFV
101: AMWLLLYFYR DHPLVLYGRH ISDRVIVFGL ILGSLWALWF INSLQCLILG VVTSVLLCLV HAIIRNSDDL FVQEKDVVVP SNFLHWS
101: AMWLLLYFYR DHPLVLYGRH ISDRVIVFGL ILGSLWALWF INSLQCLILG VVTSVLLCLV HAIIRNSDDL FVQEKDVVVP SNFLHWS
Arabidopsis Description
PRA1G1PRA1 family protein G1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZWD1]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.