Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane, peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005112.1-P | Field mustard | plastid | 89.01 | 96.43 |
| CDY63156 | Canola | plastid | 71.43 | 59.63 |
| CDY07736 | Canola | plastid | 72.53 | 59.46 |
| AT2G38360.1 | Thale cress | plastid | 69.23 | 57.27 |
| GSMUA_Achr7P22310_001 | Banana | plastid | 52.2 | 50.53 |
| GSMUA_Achr10P... | Banana | plastid | 48.35 | 48.35 |
| GSMUA_Achr5P14320_001 | Banana | plastid | 47.8 | 46.52 |
| KRH76033 | Soybean | endoplasmic reticulum | 52.75 | 43.84 |
| CDX67633 | Canola | plastid | 50.55 | 43.6 |
| Os01t0827400-01 | Rice | extracellular, mitochondrion, plasma membrane | 34.62 | 43.45 |
| PGSC0003DMT400034320 | Potato | plastid | 50.0 | 42.92 |
| CDY31997 | Canola | plastid | 49.45 | 42.86 |
| KRH65569 | Soybean | plastid | 51.65 | 41.41 |
| CDY18870 | Canola | plastid | 47.25 | 41.15 |
| CDX80758 | Canola | plastid | 48.35 | 41.12 |
| Solyc10g076360.1.1 | Tomato | plastid | 50.55 | 41.07 |
| PGSC0003DMT400041063 | Potato | plastid | 51.1 | 40.79 |
| HORVU2Hr1G086930.1 | Barley | cytosol, plastid | 24.73 | 40.18 |
| CDY27245 | Canola | plastid | 44.51 | 39.9 |
| CDX74794 | Canola | plastid | 46.15 | 39.44 |
| CDX72173 | Canola | plastid | 43.96 | 39.41 |
| GSMUA_Achr4P18690_001 | Banana | plastid | 47.8 | 39.37 |
| GSMUA_Achr5P07440_001 | Banana | plastid | 45.05 | 38.14 |
| CDX70153 | Canola | plastid | 45.05 | 38.14 |
| GSMUA_Achr3P10010_001 | Banana | plastid | 45.05 | 37.96 |
| Os11t0107600-01 | Rice | plastid | 44.51 | 36.82 |
| Os12t0107600-00 | Rice | plastid | 44.51 | 36.82 |
| KXG38626 | Sorghum | golgi, plasma membrane, plastid | 37.36 | 36.76 |
| Zm00001d010603_P002 | Maize | mitochondrion | 42.86 | 35.94 |
| TraesCS4D01G132000.1 | Wheat | plastid | 44.51 | 35.68 |
| TraesCS4A01G180500.1 | Wheat | plastid | 44.51 | 35.53 |
| KRH49465 | Soybean | plastid | 43.41 | 35.43 |
| HORVU4Hr1G024530.1 | Barley | plastid | 43.96 | 35.4 |
| OQU82692 | Sorghum | plastid | 43.41 | 35.27 |
| TraesCS4B01G137300.1 | Wheat | plastid | 43.96 | 35.24 |
| KXG22202 | Sorghum | plastid | 41.76 | 35.02 |
| CDX81033 | Canola | plastid | 41.76 | 34.86 |
| CDY58876 | Canola | plastid | 41.21 | 34.4 |
| KRH00333 | Soybean | plastid | 42.86 | 34.36 |
| EES15518 | Sorghum | plastid | 42.86 | 33.48 |
| Os05t0474400-01 | Rice | plasma membrane, vacuole | 40.11 | 33.18 |
| HORVU1Hr1G070360.1 | Barley | plastid | 40.11 | 32.88 |
| KRH32827 | Soybean | plastid | 40.66 | 32.74 |
| TraesCS1B01G307400.1 | Wheat | golgi, unclear | 39.01 | 32.27 |
| TraesCS1A01G297900.1 | Wheat | plastid | 39.01 | 32.13 |
| TraesCS1D01G293300.1 | Wheat | plastid | 39.01 | 32.13 |
| TraesCS5D01G156800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 39.56 | 31.86 |
| CDY61529 | Canola | plastid | 21.98 | 31.75 |
| TraesCS3B01G380000.1 | Wheat | plastid | 36.81 | 31.46 |
| TraesCS5A01G151600.1 | Wheat | plastid | 39.01 | 31.42 |
| TraesCS5B01G150200.1 | Wheat | plastid | 39.01 | 31.42 |
| TraesCS3A01G348100.1 | Wheat | plastid | 36.26 | 31.13 |
| HORVU3Hr1G088130.1 | Barley | plastid | 37.36 | 30.91 |
| TraesCS3D01G341700.1 | Wheat | plastid | 36.81 | 30.32 |
| Zm00001d043018_P001 | Maize | mitochondrion | 36.26 | 30.0 |
| HORVU5Hr1G047520.1 | Barley | endoplasmic reticulum, plastid | 39.56 | 29.75 |
| Zm00001d052322_P001 | Maize | plastid | 30.77 | 29.63 |
| EES03822 | Sorghum | plastid | 36.26 | 29.6 |
| CDY51735 | Canola | plasma membrane | 29.12 | 29.12 |
| CDY37483 | Canola | plasma membrane | 29.12 | 29.12 |
| KRG93818 | Soybean | extracellular, plasma membrane, vacuole | 13.19 | 28.57 |
| CDY26225 | Canola | plasma membrane | 28.02 | 27.72 |
| CDX81845 | Canola | plasma membrane | 26.92 | 27.07 |
| CDY59501 | Canola | plasma membrane | 26.37 | 26.09 |
| CDY23634 | Canola | plasma membrane | 25.82 | 25.97 |
| CDX97509 | Canola | plasma membrane | 25.82 | 25.97 |
| CDY24050 | Canola | cytosol, plasma membrane, plastid | 26.37 | 25.67 |
| CDY33064 | Canola | cytosol, plasma membrane, plastid | 25.82 | 25.13 |
| CDY50022 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 25.27 | 24.73 |
| CDY51077 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 24.73 | 24.32 |
| CDX95035 | Canola | plastid | 27.47 | 24.04 |
| CDX93539 | Canola | plastid | 26.92 | 23.56 |
| OQU79263 | Sorghum | plastid | 20.33 | 22.42 |
| CDY26125 | Canola | cytosol, plasma membrane, plastid | 23.08 | 22.22 |
| CDY17405 | Canola | plastid | 23.08 | 21.88 |
| CDY32804 | Canola | plastid | 22.53 | 21.81 |
| CDY08228 | Canola | plasma membrane | 21.98 | 21.16 |
| CDY43514 | Canola | mitochondrion | 19.78 | 20.57 |
| CDY06788 | Canola | plastid | 21.43 | 20.1 |
| CDY05662 | Canola | plastid | 7.69 | 19.18 |
| CDY25186 | Canola | plastid | 8.79 | 18.6 |
| CDX86646 | Canola | plasma membrane | 18.13 | 18.54 |
| CDY15494 | Canola | plasma membrane | 18.13 | 18.54 |
| CDY41253 | Canola | plastid | 8.24 | 17.44 |
| CDY37482 | Canola | plastid | 19.78 | 17.22 |
| CDY51734 | Canola | plastid | 19.78 | 17.22 |
| CDY51733 | Canola | plastid | 18.13 | 15.42 |
| CDY55133 | Canola | plasma membrane | 17.58 | 15.02 |
Protein Annotations
| EnsemblPlants:CDY54457 | EnsemblPlantsGene:GSBRNA2T00014121001 | GO:A0A078IYP9 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Prenylated_rab_accept_PRA1 | PANTHER:PTHR19317 | PANTHER:PTHR19317:SF34 | PFAM:PF03208 | ProteinID:CDY54457 | ProteinID:CDY54457.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EDEDCC | UniProt:A0A078IYP9 | MapMan:22.8.4.3.2 | : |
Description
BnaAnng13230DPRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A078IYP9]
Coordinates
chrLK033321:-:39617..40224
Molecular Weight (calculated)
19853.2 Da
IEP (calculated)
5.438
GRAVY (calculated)
0.768
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSISIRENM ITINWAIYPL FTCQTLPDNG FHVTTNPPNL HLSNYSYFKV NYLAVATAIV GFSLVTHPFP LAFLLCLLAS WLFFYLLRPS DHPVVVFGRT
101: FSDMETLGCL ILFSVFVVFL TDVGSVLVSA VMVGVALVCA HGAFRAPEDL FLDEQETAAT GFLSFLGNAS YSAAPAVVAA RA
101: FSDMETLGCL ILFSVFVVFL TDVGSVLVSA VMVGVALVCA HGAFRAPEDL FLDEQETAAT GFLSFLGNAS YSAAPAVVAA RA
001: MASSAPPVLP ISNPQTVPSA APSSVESQPP IATPAFRNFI NQITETVKNG LSKRRPWAEL ADRSALSKPE SISDAAVRIR KNYSYFKVNY LTVATAIVGF
101: SLVTHPFSLV FLLCLLASWL FLYLFRPTDQ PIVLFGRTFS DRETLGCLIL FSIFVIFLTD VGSVLVSAMM IGVALICAHG AFRAPEDLFL DEQEPAATGF
201: LSFLGGAASS AAPAVIAARV
101: SLVTHPFSLV FLLCLLASWL FLYLFRPTDQ PIVLFGRTFS DRETLGCLIL FSIFVIFLTD VGSVLVSAMM IGVALICAHG AFRAPEDLFL DEQEPAATGF
201: LSFLGGAASS AAPAVIAARV
Arabidopsis Description
PRA1B4PRA1 family protein B4 [Source:UniProtKB/Swiss-Prot;Acc:O80915]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.