Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000056.1-P | Field mustard | plastid | 90.91 | 90.09 |
| CDY63156 | Canola | plastid | 89.09 | 89.91 |
| CDY07736 | Canola | plastid | 90.0 | 89.19 |
| Bra005112.1-P | Field mustard | plastid | 56.82 | 74.4 |
| CDY54457 | Canola | endoplasmic reticulum, peroxisome, plasma membrane | 57.27 | 69.23 |
| CDY61529 | Canola | plastid | 37.73 | 65.87 |
| Solyc10g076360.1.1 | Tomato | plastid | 65.0 | 63.84 |
| PGSC0003DMT400041063 | Potato | plastid | 65.45 | 63.16 |
| GSMUA_Achr7P22310_001 | Banana | plastid | 53.18 | 62.23 |
| AT3G56110.1 | Thale cress | plastid | 58.64 | 61.72 |
| KRH76033 | Soybean | endoplasmic reticulum | 61.36 | 61.64 |
| GSMUA_Achr10P... | Banana | plastid | 50.45 | 60.99 |
| PGSC0003DMT400034320 | Potato | plastid | 58.64 | 60.85 |
| GSMUA_Achr5P14320_001 | Banana | plastid | 51.36 | 60.43 |
| AT5G01640.1 | Thale cress | plastid | 60.91 | 60.09 |
| GSMUA_Achr4P18690_001 | Banana | plastid | 60.0 | 59.73 |
| KRH65569 | Soybean | plastid | 60.91 | 59.03 |
| GSMUA_Achr5P07440_001 | Banana | plastid | 55.0 | 56.28 |
| GSMUA_Achr3P10010_001 | Banana | plastid | 54.09 | 55.09 |
| AT4G00005.1 | Thale cress | extracellular, plasma membrane | 29.55 | 55.08 |
| AT2G40380.1 | Thale cress | plastid | 52.73 | 54.46 |
| Zm00001d010603_P002 | Maize | mitochondrion | 53.18 | 53.92 |
| KRG93818 | Soybean | extracellular, plasma membrane, vacuole | 20.45 | 53.57 |
| KXG22202 | Sorghum | plastid | 52.27 | 53.0 |
| Os12t0107600-00 | Rice | plastid | 51.82 | 51.82 |
| Os11t0107600-01 | Rice | plastid | 51.82 | 51.82 |
| TraesCS1B01G307400.1 | Wheat | golgi, unclear | 50.91 | 50.91 |
| HORVU1Hr1G070360.1 | Barley | plastid | 51.36 | 50.9 |
| HORVU4Hr1G024530.1 | Barley | plastid | 52.27 | 50.88 |
| KRH49465 | Soybean | plastid | 51.36 | 50.67 |
| TraesCS4D01G132000.1 | Wheat | plastid | 52.27 | 50.66 |
| TraesCS4B01G137300.1 | Wheat | plastid | 52.27 | 50.66 |
| TraesCS1D01G293300.1 | Wheat | plastid | 50.45 | 50.23 |
| Os05t0474400-01 | Rice | plasma membrane, vacuole | 50.0 | 50.0 |
| TraesCS4A01G180500.1 | Wheat | plastid | 51.82 | 50.0 |
| KRH00333 | Soybean | plastid | 51.36 | 49.78 |
| TraesCS1A01G297900.1 | Wheat | plastid | 50.0 | 49.77 |
| KRH32827 | Soybean | plastid | 50.91 | 49.56 |
| AT5G07110.1 | Thale cress | plastid | 47.73 | 48.61 |
| HORVU3Hr1G088130.1 | Barley | plastid | 48.18 | 48.18 |
| Zm00001d052322_P001 | Maize | plastid | 40.91 | 47.62 |
| OQU82692 | Sorghum | plastid | 48.18 | 47.32 |
| TraesCS3A01G348100.1 | Wheat | plastid | 45.45 | 47.17 |
| TraesCS3D01G341700.1 | Wheat | plastid | 46.82 | 46.61 |
| TraesCS3B01G380000.1 | Wheat | plastid | 45.0 | 46.48 |
| Zm00001d043018_P001 | Maize | mitochondrion | 46.36 | 46.36 |
| EES15518 | Sorghum | plastid | 49.09 | 46.35 |
| Os01t0827400-01 | Rice | extracellular, mitochondrion, plasma membrane | 30.45 | 46.21 |
| EES03822 | Sorghum | plastid | 45.91 | 45.29 |
| HORVU2Hr1G086930.1 | Barley | cytosol, plastid | 22.73 | 44.64 |
| AT5G05380.2 | Thale cress | plasma membrane | 57.27 | 44.37 |
| TraesCS5B01G150200.1 | Wheat | plastid | 45.45 | 44.25 |
| TraesCS5A01G151600.1 | Wheat | plastid | 45.0 | 43.81 |
| TraesCS5D01G156800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 45.0 | 43.81 |
| HORVU5Hr1G047520.1 | Barley | endoplasmic reticulum, plastid | 44.55 | 40.5 |
| KXG38626 | Sorghum | golgi, plasma membrane, plastid | 32.27 | 38.38 |
| OQU79263 | Sorghum | plastid | 25.0 | 33.33 |
| AT3G13720.1 | Thale cress | cytosol, plasma membrane, plastid | 28.18 | 32.98 |
| AT1G55190.1 | Thale cress | plasma membrane | 28.18 | 32.8 |
| AT1G17700.1 | Thale cress | plasma membrane | 26.82 | 32.78 |
| AT3G13710.1 | Thale cress | plasma membrane | 27.73 | 32.45 |
| AT1G08770.1 | Thale cress | plastid | 28.18 | 29.67 |
| AT5G56230.1 | Thale cress | plasma membrane, plastid | 25.0 | 29.57 |
| AT1G04260.1 | Thale cress | plasma membrane | 24.09 | 29.12 |
| AT4G29658.2 | Thale cress | plastid | 24.55 | 28.42 |
| AT1G55640.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 24.09 | 28.34 |
Protein Annotations
| MapMan:22.8.4.3.2 | EntrezGene:818416 | ProteinID:AAC28768.1 | ProteinID:AEC09527.1 | EMBL:AK229076 | ArrayExpress:AT2G38360 |
| EnsemblPlantsGene:AT2G38360 | RefSeq:AT2G38360 | TAIR:AT2G38360 | RefSeq:AT2G38360-TAIR-G | EnsemblPlants:AT2G38360.1 | TAIR:AT2G38360.1 |
| EMBL:BT010689 | EMBL:BT011785 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005768 | GO:GO:0005783 | GO:GO:0005794 | GO:GO:0005802 | GO:GO:0005829 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0010008 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016192 | RefSeq:NP_181370.1 |
| UniProt:O80915 | PFAM:PF03208 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | Symbol:PRA1.B4 |
| PANTHER:PTHR19317 | PANTHER:PTHR19317:SF34 | InterPro:Prenylated_rab_accept_PRA1 | TMHMM:TMhelix | UniParc:UPI00000A4F89 | SEG:seg |
Description
PRA1B4PRA1 family protein B4 [Source:UniProtKB/Swiss-Prot;Acc:O80915]
Coordinates
chr2:-:16069386..16070664
Molecular Weight (calculated)
23671.8 Da
IEP (calculated)
8.053
GRAVY (calculated)
0.515
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSAPPVLP ISNPQTVPSA APSSVESQPP IATPAFRNFI NQITETVKNG LSKRRPWAEL ADRSALSKPE SISDAAVRIR KNYSYFKVNY LTVATAIVGF
101: SLVTHPFSLV FLLCLLASWL FLYLFRPTDQ PIVLFGRTFS DRETLGCLIL FSIFVIFLTD VGSVLVSAMM IGVALICAHG AFRAPEDLFL DEQEPAATGF
201: LSFLGGAASS AAPAVIAARV
101: SLVTHPFSLV FLLCLLASWL FLYLFRPTDQ PIVLFGRTFS DRETLGCLIL FSIFVIFLTD VGSVLVSAMM IGVALICAHG AFRAPEDLFL DEQEPAATGF
201: LSFLGGAASS AAPAVIAARV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.