Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 5
- extracellular 1
- plasma membrane 3
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G38360.1 | KRH10292 | AT3G46060.1 | 21798944 |
| AT2G38360.1 | KRH23030 | AT3G46060.1 | 21798944 |
| AT2G38360.1 | KRH24835 | AT3G46060.1 | 21798944 |
| AT2G38360.1 | KRH29838 | AT3G46060.1 | 21798944 |
| AT2G38360.1 | KRG98294 | AT5G58750.1 | 21798944 |
| AT2G38360.1 | KRH30354 | AT5G58750.1 | 21798944 |
| AT5G01640.1 | KRH14895 | AT2G40380.1 | 21798944 |
| AT5G01640.1 | KRH54835 | AT2G40380.1 | 21798944 |
| AT5G01640.1 | KRH73238 | AT2G40380.1 | 21798944 |
| AT5G01640.1 | KRH08874 | AT4G25660.1 | 21798944 |
| AT5G01640.1 | KRH35244 | AT4G25660.1 | 21798944 |
| AT5G01640.1 | KRH38387 | AT4G25660.1 | 21798944 |
| AT5G01640.1 | KRG93818 | AT5G01640.1 | 21798944 |
| AT5G01640.1 | KRH00333 | AT5G01640.1 | 21798944 |
| AT5G01640.1 | KRH32827 | AT5G01640.1 | 21798944 |
| AT5G01640.1 | KRH49465 | AT5G01640.1 | 21798944 |
| AT5G01640.1 | KRH65569 | AT5G01640.1 | 21798944 |
| AT5G01640.1 | KRH76033 | AT5G01640.1 | 21798944 |
| AT5G01640.1 | KRH14565 | AT5G12390.1 | 21798944 |
| AT5G01640.1 | KRH73559 | AT5G12390.1 | 21798944 |
| AT5G01640.1 | KRH41254 | AT5G41600.1 | 21798944 |
| AT5G01640.1 | KRH59988 | AT5G41600.1 | 21798944 |
| AT5G01640.1 | KRG98294 | AT5G58750.1 | 21798944 |
| AT5G01640.1 | KRH30354 | AT5G58750.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG93818 | Soybean | extracellular, plasma membrane, vacuole | 29.2 | 78.57 |
| KRH76033 | Soybean | endoplasmic reticulum | 72.57 | 74.89 |
| KRH65569 | Soybean | plastid | 73.45 | 73.13 |
| KRH54835 | Soybean | endoplasmic reticulum, extracellular, vacuole | 25.22 | 52.78 |
| Bra000056.1-P | Field mustard | plastid | 51.77 | 52.7 |
| KRH73238 | Soybean | plastid | 50.0 | 52.56 |
| CDY63156 | Canola | plastid | 50.44 | 52.29 |
| CDY07736 | Canola | plastid | 51.33 | 52.25 |
| Solyc10g076360.1.1 | Tomato | plastid | 51.33 | 51.79 |
| KRH14895 | Soybean | plastid | 48.67 | 51.16 |
| AT2G38360.1 | Thale cress | plastid | 49.56 | 50.91 |
| PGSC0003DMT400041063 | Potato | plastid | 51.33 | 50.88 |
| PGSC0003DMT400034320 | Potato | plastid | 46.9 | 50.0 |
| GSMUA_Achr4P18690_001 | Banana | plastid | 48.23 | 49.32 |
| GSMUA_Achr5P14320_001 | Banana | plastid | 39.82 | 48.13 |
| GSMUA_Achr7P22310_001 | Banana | plastid | 38.5 | 46.28 |
| AT5G01640.1 | Thale cress | plastid | 45.58 | 46.19 |
| GSMUA_Achr10P... | Banana | plastid | 36.73 | 45.6 |
| KRH00333 | Soybean | plastid | 45.58 | 45.37 |
| CDX80758 | Canola | plastid | 42.92 | 45.33 |
| Zm00001d010603_P002 | Maize | mitochondrion | 42.92 | 44.7 |
| GSMUA_Achr5P07440_001 | Banana | plastid | 42.48 | 44.65 |
| Os05t0474400-01 | Rice | plasma membrane, vacuole | 43.36 | 44.55 |
| KRH49465 | Soybean | plastid | 43.81 | 44.39 |
| KXG22202 | Sorghum | plastid | 42.48 | 44.24 |
| AT4G00005.1 | Thale cress | extracellular, plasma membrane | 23.01 | 44.07 |
| GSMUA_Achr3P10010_001 | Banana | plastid | 42.04 | 43.98 |
| Bra005112.1-P | Field mustard | plastid | 32.3 | 43.45 |
| Os01t0827400-01 | Rice | extracellular, mitochondrion, plasma membrane | 27.88 | 43.45 |
| TraesCS4A01G180500.1 | Wheat | plastid | 42.48 | 42.11 |
| TraesCS1D01G293300.1 | Wheat | plastid | 40.71 | 41.63 |
| TraesCS1A01G297900.1 | Wheat | plastid | 40.71 | 41.63 |
| HORVU4Hr1G024530.1 | Barley | plastid | 41.59 | 41.59 |
| TraesCS4D01G132000.1 | Wheat | plastid | 41.59 | 41.41 |
| TraesCS1B01G307400.1 | Wheat | golgi, unclear | 40.27 | 41.36 |
| Os12t0107600-00 | Rice | plastid | 40.27 | 41.36 |
| Os11t0107600-01 | Rice | plastid | 40.27 | 41.36 |
| CDY61529 | Canola | plastid | 23.01 | 41.27 |
| TraesCS4B01G137300.1 | Wheat | plastid | 41.15 | 40.97 |
| CDY54457 | Canola | endoplasmic reticulum, peroxisome, plasma membrane | 32.74 | 40.66 |
| HORVU1Hr1G070360.1 | Barley | plastid | 39.82 | 40.54 |
| TraesCS3B01G380000.1 | Wheat | plastid | 37.61 | 39.91 |
| TraesCS3A01G348100.1 | Wheat | plastid | 37.17 | 39.62 |
| TraesCS3D01G341700.1 | Wheat | plastid | 38.5 | 39.37 |
| OQU82692 | Sorghum | plastid | 38.94 | 39.29 |
| EES03822 | Sorghum | plastid | 38.5 | 39.01 |
| HORVU3Hr1G088130.1 | Barley | plastid | 37.61 | 38.64 |
| Zm00001d052322_P001 | Maize | plastid | 32.3 | 38.62 |
| EES15518 | Sorghum | plastid | 38.94 | 37.77 |
| TraesCS5D01G156800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 37.61 | 37.61 |
| TraesCS5A01G151600.1 | Wheat | plastid | 37.61 | 37.61 |
| HORVU2Hr1G086930.1 | Barley | cytosol, plastid | 18.58 | 37.5 |
| Zm00001d043018_P001 | Maize | mitochondrion | 36.28 | 37.27 |
| TraesCS5B01G150200.1 | Wheat | plastid | 37.17 | 37.17 |
| HORVU5Hr1G047520.1 | Barley | endoplasmic reticulum, plastid | 37.17 | 34.71 |
| KRH71325 | Soybean | plastid | 26.99 | 34.46 |
| KRH23330 | Soybean | plastid | 26.99 | 33.15 |
| KRH04803 | Soybean | plastid | 14.16 | 32.65 |
| KRG95630 | Soybean | plastid | 28.76 | 32.5 |
| KXG38626 | Sorghum | golgi, plasma membrane, plastid | 26.55 | 32.43 |
| KRH32112 | Soybean | plastid | 26.11 | 32.07 |
| KRH10001 | Soybean | mitochondrion | 26.11 | 32.07 |
| KRG92690 | Soybean | plastid | 26.99 | 31.77 |
| KRH34097 | Soybean | plastid | 26.11 | 31.05 |
| KRH44167 | Soybean | plasma membrane | 23.89 | 30.68 |
| KRH67312 | Soybean | plastid | 26.99 | 30.35 |
| KRH47141 | Soybean | plasma membrane | 23.89 | 30.34 |
| KRH34380 | Soybean | cytosol, plastid | 22.12 | 29.59 |
| OQU79263 | Sorghum | plastid | 19.03 | 26.06 |
| KRH74153 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 20.8 | 23.5 |
| KRH49060 | Soybean | plasma membrane | 20.35 | 23.23 |
Protein Annotations
| EMBL:ACUP02006177 | EnsemblPlants:KRH32827 | EnsemblPlantsGene:GLYMA_10G079100 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:Prenylated_rab_accept_PRA1 | PANTHER:PTHR19317 | PANTHER:PTHR19317:SF34 | PFAM:PF03208 |
| ProteinID:KRH32827 | ProteinID:KRH32827.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI00023C9745 | UniProt:I1L9J0 |
| MapMan:22.8.4.3.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:8960669..8962364
Molecular Weight (calculated)
25426.7 Da
IEP (calculated)
8.514
GRAVY (calculated)
0.273
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSTAPPVLP ISNPQTTART TSAGGGAIKA PANNLTFCAF INNLSTSLHH GLDQCRPWSE LADRSTFSKP ESSKATLRVR KNFSYFHTNY YVVVSLILAV
101: SLLTVNPICP TFTNHFSLIL HIGLLASWTF LYLFRPSDQP FVILSRTFSD FETLALLSTF TVFVFFLTSV RSVLILILML DAAVIFLHNA FCMSEDLFLD
201: DQENSQAIGF LSFLHRCRHR RHHSHH
101: SLLTVNPICP TFTNHFSLIL HIGLLASWTF LYLFRPSDQP FVILSRTFSD FETLALLSTF TVFVFFLTSV RSVLILILML DAAVIFLHNA FCMSEDLFLD
201: DQENSQAIGF LSFLHRCRHR RHHSHH
001: MASSAPPVLP ISNPQTVPSA APSSVESQPP IATPAFRNFI NQITETVKNG LSKRRPWAEL ADRSALSKPE SISDAAVRIR KNYSYFKVNY LTVATAIVGF
101: SLVTHPFSLV FLLCLLASWL FLYLFRPTDQ PIVLFGRTFS DRETLGCLIL FSIFVIFLTD VGSVLVSAMM IGVALICAHG AFRAPEDLFL DEQEPAATGF
201: LSFLGGAASS AAPAVIAARV
101: SLVTHPFSLV FLLCLLASWL FLYLFRPTDQ PIVLFGRTFS DRETLGCLIL FSIFVIFLTD VGSVLVSAMM IGVALICAHG AFRAPEDLFL DEQEPAATGF
201: LSFLGGAASS AAPAVIAARV
Arabidopsis Description
PRA1B4PRA1 family protein B4 [Source:UniProtKB/Swiss-Prot;Acc:O80915]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.