CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030561.1-P	Field mustard	plasma membrane	46.15	43.82
CDY15494	Canola	plasma membrane	46.15	43.82
CDX86646	Canola	plasma membrane	44.97	42.7
AT1G04260.1	Thale cress	plasma membrane	44.38	41.21
KRH71325	Soybean	plastid	37.87	36.16
PGSC0003DMT400015659	Potato	plasma membrane	34.91	35.12
KRH32112	Soybean	plastid	37.28	34.24
KRH10001	Soybean	mitochondrion	37.28	34.24
KRH34097	Soybean	plastid	38.46	34.21
Solyc09g083320.1.1	Tomato	plasma membrane	33.73	33.93
KRG92690	Soybean	plastid	38.46	33.85
KRG93818	Soybean	extracellular, plasma membrane, vacuole	16.57	33.33
KRH23330	Soybean	plastid	36.09	33.15
KRH47141	Soybean	plasma membrane	34.32	32.58
KRH44167	Soybean	plasma membrane	31.36	30.11
KRH67312	Soybean	plastid	33.73	28.36
KRG95630	Soybean	plastid	33.14	28.0
KRH74153	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	31.95	27.0
KRH49060	Soybean	plasma membrane	31.36	26.77
KRH00333	Soybean	plastid	34.32	25.55
KRH49465	Soybean	plastid	33.14	25.11
KRH76033	Soybean	endoplasmic reticulum	31.95	24.66
KRH04803	Soybean	plastid	14.2	24.49
KRH65569	Soybean	plastid	32.54	24.23
KRH73238	Soybean	plastid	30.18	23.72
KRH14895	Soybean	plastid	30.18	23.72
KRH54835	Soybean	endoplasmic reticulum, extracellular, vacuole	14.2	22.22
KRH32827	Soybean	plastid	29.59	22.12

Protein Annotations

EntrezGene:100781470	MapMan:22.8.4.3.2	EMBL:ACUP02006594	EnsemblPlantsGene:GLYMA_10G180400	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016192	UniProt:I1LC48	EnsemblPlants:KRH34380	ProteinID:KRH34380	ProteinID:KRH34380.1
PFAM:PF03208	PANTHER:PTHR19317	PANTHER:PTHR19317:SF7	InterPro:Prenylated_rab_accept_PRA1	TMHMM:TMhelix	UniParc:UPI000233D372
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:41405837..41406848

Molecular Weight (calculated)

18773.1 Da

IEP (calculated)

5.008

GRAVY (calculated)

0.755

Length

169 amino acids

Sequence
(BLAST)

001: MWPSAEMLSN IKEASQSVVS TRRPWRVFLD PSSLSLPSSI SETTTRLAHN LTYFLFNYAL LLLLVFLLTL LRHPFPLLLF LLLSAAWYFL YFSRDDLPIA
101: IIPLSLVTLV ALFATGAWLY LLLAVLIAAV VVFLHAALRS TDELVGDDQE SPYGPMLGDT PATGAYVPV

Best Arabidopsis Sequence Match ( AT1G04260.1 )
(BLAST)

001: MANQVITGIK ETAQSITGAA RPWGDFLDLS AFSFPSSIAD ATTRVTQNLT HFRINYSIIL SILLGLTLIT RPIAILAFIA VGLAWFFLYF AREEPLTIFG
101: FTIDDGIVAV LLIGLSIGSL VTTGVWLRAL TTVGFGVLVL ILHAALRGTD DLVSDDLESP YGPMLSTSGG GNDGARGDYS GI

Arabidopsis Description

PRA1DPRA1 family protein D [Source:UniProtKB/Swiss-Prot;Acc:P93829]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.