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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • plastid 7
  • peroxisome 2
  • plasma membrane 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:peroxisome, plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:peroxisome
Plant-mPloc:plasma membrane
Predotar:plastid
PProwler:secretory
PTS1:peroxisome
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
 endoplasmic reticulum: 27224218
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG93818
KRG98294
KRH00333
KRH08874
KRH10292
KRH14565
KRH14895
KRH23030
KRH24835
KRH29838
KRH30354
KRH32827
KRH35244
KRH38387
KRH41254
KRH49465
KRH54835
KRH59988
KRH65569
KRH73238
KRH73559
KRH76033

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G38360.1 KRH10292 AT3G46060.1 21798944
AT2G38360.1 KRH23030 AT3G46060.1 21798944
AT2G38360.1 KRH24835 AT3G46060.1 21798944
AT2G38360.1 KRH29838 AT3G46060.1 21798944
AT2G38360.1 KRG98294 AT5G58750.1 21798944
AT2G38360.1 KRH30354 AT5G58750.1 21798944
AT5G01640.1 KRH14895 AT2G40380.1 21798944
AT5G01640.1 KRH54835 AT2G40380.1 21798944
AT5G01640.1 KRH73238 AT2G40380.1 21798944
AT5G01640.1 KRH08874 AT4G25660.1 21798944
AT5G01640.1 KRH35244 AT4G25660.1 21798944
AT5G01640.1 KRH38387 AT4G25660.1 21798944
AT5G01640.1 KRG93818 AT5G01640.1 21798944
AT5G01640.1 KRH00333 AT5G01640.1 21798944
AT5G01640.1 KRH32827 AT5G01640.1 21798944
AT5G01640.1 KRH49465 AT5G01640.1 21798944
AT5G01640.1 KRH65569 AT5G01640.1 21798944
AT5G01640.1 KRH76033 AT5G01640.1 21798944
AT5G01640.1 KRH14565 AT5G12390.1 21798944
AT5G01640.1 KRH73559 AT5G12390.1 21798944
AT5G01640.1 KRH41254 AT5G41600.1 21798944
AT5G01640.1 KRH59988 AT5G41600.1 21798944
AT5G01640.1 KRG98294 AT5G58750.1 21798944
AT5G01640.1 KRH30354 AT5G58750.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH65569 Soybean plastid 95.89 92.51
KRG93818 Soybean extracellular, plasma membrane, vacuole 31.51 82.14
KRH32827 Soybean plastid 74.89 72.57
KRH54835 Soybean endoplasmic reticulum, extracellular, vacuole 32.88 66.67
KRH73238 Soybean plastid 63.93 65.12
CDY63156 Canola plastid 63.93 64.22
Bra000056.1-P Field mustard plastid 64.84 63.96
KRH14895 Soybean plastid 62.56 63.72
CDY07736 Canola plastid 64.38 63.51
Solyc10g076360.1.1 Tomato plastid 63.93 62.5
PGSC0003DMT400034320 Potato plastid 60.27 62.26
AT2G38360.1 Thale cress plastid 61.64 61.36
PGSC0003DMT400041063 Potato plastid 63.47 60.96
GSMUA_Achr7P22310_001 Banana plastid 51.6 60.11
GSMUA_Achr5P14320_001 Banana plastid 51.14 59.89
GSMUA_Achr10P... Banana plastid 48.86 58.79
GSMUA_Achr4P18690_001 Banana plastid 57.99 57.47
GSMUA_Achr5P07440_001 Banana plastid 56.16 57.21
KRH49465 Soybean plastid 57.99 56.95
Bra005112.1-P Field mustard plastid 43.38 56.55
CDX80758 Canola plastid 55.25 56.54
KRH00333 Soybean plastid 58.45 56.39
GSMUA_Achr3P10010_001 Banana plastid 54.79 55.56
AT5G01640.1 Thale cress plastid 55.25 54.26
Zm00001d010603_P002 Maize mitochondrion 52.51 53.0
KXG22202 Sorghum plastid 52.51 53.0
CDY54457 Canola endoplasmic reticulum, peroxisome, plasma membrane 43.84 52.75
AT4G00005.1 Thale cress extracellular, plasma membrane 28.31 52.54
Os01t0827400-01 Rice extracellular, mitochondrion, plasma membrane 34.7 52.41
Os05t0474400-01 Rice plasma membrane, vacuole 52.51 52.27
HORVU4Hr1G024530.1 Barley plastid 53.88 52.21
TraesCS4A01G180500.1 Wheat plastid 54.34 52.19
TraesCS4D01G132000.1 Wheat plastid 53.88 51.98
TraesCS4B01G137300.1 Wheat plastid 53.42 51.54
Os11t0107600-01 Rice plastid 51.14 50.91
Os12t0107600-00 Rice plastid 50.68 50.45
Zm00001d052322_P001 Maize plastid 43.38 50.26
TraesCS1A01G297900.1 Wheat plastid 50.23 49.77
TraesCS1D01G293300.1 Wheat plastid 50.23 49.77
OQU82692 Sorghum plastid 50.68 49.55
TraesCS1B01G307400.1 Wheat golgi, unclear 49.77 49.55
HORVU1Hr1G070360.1 Barley plastid 49.32 48.65
EES15518 Sorghum plastid 50.23 47.21
TraesCS3A01G348100.1 Wheat plastid 45.66 47.17
EES03822 Sorghum plastid 47.95 47.09
TraesCS3B01G380000.1 Wheat plastid 45.66 46.95
TraesCS3D01G341700.1 Wheat plastid 47.03 46.61
TraesCS5D01G156800.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 47.49 46.02
TraesCS5A01G151600.1 Wheat plastid 47.49 46.02
HORVU3Hr1G088130.1 Barley plastid 46.12 45.91
TraesCS5B01G150200.1 Wheat plastid 47.03 45.58
Zm00001d043018_P001 Maize mitochondrion 45.66 45.45
CDY61529 Canola plastid 25.57 44.44
KXG38626 Sorghum golgi, plasma membrane, plastid 35.62 42.16
HORVU5Hr1G047520.1 Barley endoplasmic reticulum, plastid 46.58 42.15
HORVU2Hr1G086930.1 Barley cytosol, plastid 21.46 41.96
KRH71325 Soybean plastid 32.88 40.68
KRG95630 Soybean plastid 35.62 39.0
KRH32112 Soybean plastid 31.51 37.5
KRH44167 Soybean plasma membrane 30.14 37.5
KRH67312 Soybean plastid 34.25 37.31
KRG92690 Soybean plastid 32.42 36.98
KRH47141 Soybean plasma membrane 29.68 36.52
KRH10001 Soybean mitochondrion 30.59 36.41
KRH23330 Soybean plastid 30.59 36.41
KRH34097 Soybean plastid 31.51 36.32
KRH04803 Soybean plastid 15.07 33.67
KRH34380 Soybean cytosol, plastid 24.66 31.95
OQU79263 Sorghum plastid 23.74 31.52
KRH49060 Soybean plasma membrane 24.66 27.27
KRH74153 Soybean endoplasmic reticulum, peroxisome, plasma membrane 24.66 27.0
Protein Annotations
EMBL:ACUP02000549EnsemblPlants:KRH76033EnsemblPlantsGene:GLYMA_01G125900EntrezGene:100804273GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021InterPro:Prenylated_rab_accept_PRA1PANTHER:PTHR19317PANTHER:PTHR19317:SF34
PFAM:PF03208ProteinID:KRH76033ProteinID:KRH76033.1SEG:segTMHMM:TMhelixUniParc:UPI00023375E7
UniProt:I1J7I4MapMan:22.8.4.3.2::::
Description
hypothetical protein
Coordinates
chr1:-:43473869..43475221
Molecular Weight (calculated)
23522.4 Da
IEP (calculated)
8.478
GRAVY (calculated)
0.487
Length
219 amino acids
Sequence
(BLAST)
001: MSSTAAPVLP ISNPQTTAAG GGAIEAPANN PAFRAFINNL SASLRHGLDQ RRPWSELGDR SAFSKPESFS EATLRVRKNF SYFRVNYYAV VSLILAVSLL
101: TNPFSLILLV GLLASWTFLY LFRPSDQPLV ILGRTFSDFE TLALLSAFTV FVVFLTSVGS VLVSALMLGV AVVCLHGAFR VPEDLFLDDQ DNSQATGFLS
201: FLRGPAASAT AVPTVAARV
Best Arabidopsis Sequence Match ( AT2G38360.1 )
(BLAST)
001: MASSAPPVLP ISNPQTVPSA APSSVESQPP IATPAFRNFI NQITETVKNG LSKRRPWAEL ADRSALSKPE SISDAAVRIR KNYSYFKVNY LTVATAIVGF
101: SLVTHPFSLV FLLCLLASWL FLYLFRPTDQ PIVLFGRTFS DRETLGCLIL FSIFVIFLTD VGSVLVSAMM IGVALICAHG AFRAPEDLFL DEQEPAATGF
201: LSFLGGAASS AAPAVIAARV
Arabidopsis Description
PRA1B4PRA1 family protein B4 [Source:UniProtKB/Swiss-Prot;Acc:O80915]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.