Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- plasma membrane 1
- cytosol 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH30354 | Soybean | cytosol | 85.53 | 89.39 |
| AT5G58750.1 | Thale cress | cytosol | 58.38 | 59.59 |
| Bra002620.1-P | Field mustard | cytosol | 56.85 | 58.03 |
| CDY52126 | Canola | cytosol | 56.35 | 57.66 |
| CDY67905 | Canola | cytosol | 56.6 | 57.62 |
| GSMUA_Achr5P28860_001 | Banana | plastid | 49.75 | 47.12 |
| KRH52063 | Soybean | nucleus | 38.83 | 39.43 |
| KRH50766 | Soybean | endoplasmic reticulum, plastid | 34.52 | 36.36 |
| KRH15431 | Soybean | cytosol | 6.09 | 35.29 |
Protein Annotations
| EMBL:ACUP02010865 | EnsemblPlants:KRG98294 | EnsemblPlantsGene:GLYMA_18G063300 | EntrezGene:100779347 | Gene3D:3.40.50.720 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0050662 | InterPro:Epimerase_deHydtase | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR32487 |
| PANTHER:PTHR32487:SF7 | PFAM:PF01370 | ProteinID:KRG98294 | ProteinID:KRG98294.1 | SEG:seg | SUPFAM:SSF51735 |
| UniParc:UPI000295673D | UniProt:I1N001 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr18:+:5788627..5790510
Molecular Weight (calculated)
44817.0 Da
IEP (calculated)
7.972
GRAVY (calculated)
-0.108
Length
394 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSIWKGGSA SRAPHVAMAA TIETSSYVAI IFGVTGLVGR ELARRLLLEP SWKKVYGIAR NPETPPTLII SPCYHFISCN LLNPLKTQKK LSGLQDVTHV
101: FWVTWASQFP SETQESCDQN KAMMCNALNS MVSVAKNLKH VSLQTGTKHY VSLHPPFDEE KFHYYYYHEE FPRMSRSLNF YYALEDLLME KLSGKVSWSV
201: HRPGLLFGSS VRSFYNFMGS LCVYGAICKH LRLPFVFGGT RKCWEESYID GSDARLVADQ HIWAATNGDI ISINGQAFNS INGPSFTWKE IWPIVGKKMG
301: VQVPQDMVVE SFWFSKAMTG KEEVWEEIVE ENGLVHTTVE NLANWEFLDA LFRFPLKLLG CRNKVDGLGF GARYKTLNSI LYWIDCMRDE KLIP
101: FWVTWASQFP SETQESCDQN KAMMCNALNS MVSVAKNLKH VSLQTGTKHY VSLHPPFDEE KFHYYYYHEE FPRMSRSLNF YYALEDLLME KLSGKVSWSV
201: HRPGLLFGSS VRSFYNFMGS LCVYGAICKH LRLPFVFGGT RKCWEESYID GSDARLVADQ HIWAATNGDI ISINGQAFNS INGPSFTWKE IWPIVGKKMG
301: VQVPQDMVVE SFWFSKAMTG KEEVWEEIVE ENGLVHTTVE NLANWEFLDA LFRFPLKLLG CRNKVDGLGF GARYKTLNSI LYWIDCMRDE KLIP
001: MGSENGSLMR RNEVDENVAL IFGVTGLVGR EIVKTLLMSK PGWRIYGVAR NPEINSMTKM YNFISCDLLN ASETKQRLSP LQDIVSHVFW VTWSGEFPLD
101: TDECCVQNKT MLMNALDAIL PNAKRLKHFS LQTGMKHYVS LVEETMARGE GSSLYYYSEE CPRKSSGKNF YYVLEDLLKE KITRSSVVWS VQRPGLLMGS
201: SSRTLYNFMG SLCVYGAMCK YLNLPFVFGG TRECWEESYI DGSDSNLVAE QHIFAATSGK VREKGEAFNA INGVGFTWKE IWPEIGKKLG VQVNETTMFD
301: EGFWFGREMV ERKHVWDEIV VKEKLVRTEI EDLANWYFLD ALFRCPFKLL GKREKVDRFG FKRKYRTLDS VLYWIDVMRD EKLIPL
101: TDECCVQNKT MLMNALDAIL PNAKRLKHFS LQTGMKHYVS LVEETMARGE GSSLYYYSEE CPRKSSGKNF YYVLEDLLKE KITRSSVVWS VQRPGLLMGS
201: SSRTLYNFMG SLCVYGAMCK YLNLPFVFGG TRECWEESYI DGSDSNLVAE QHIFAATSGK VREKGEAFNA INGVGFTWKE IWPEIGKKLG VQVNETTMFD
301: EGFWFGREMV ERKHVWDEIV VKEKLVRTEI EDLANWYFLD ALFRCPFKLL GKREKVDRFG FKRKYRTLDS VLYWIDVMRD EKLIPL
Arabidopsis Description
At5g58750 [Source:UniProtKB/TrEMBL;Acc:Q9LUY6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.