Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 5
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG98294 | Soybean | mitochondrion | 47.12 | 49.75 |
| Bra002620.1-P | Field mustard | cytosol | 45.91 | 49.48 |
| CDY67905 | Canola | cytosol | 45.91 | 49.35 |
| CDY52126 | Canola | cytosol | 45.67 | 49.35 |
| AT5G58750.1 | Thale cress | cytosol | 45.43 | 48.96 |
| KRH30354 | Soybean | cytosol | 43.51 | 48.01 |
| GSMUA_Achr3P30170_001 | Banana | cytosol | 30.05 | 36.02 |
| GSMUA_Achr4P16440_001 | Banana | cytosol | 29.57 | 35.55 |
| GSMUA_Achr6P24680_001 | Banana | golgi | 24.28 | 33.55 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P28860_001 | EnsemblPlants:GSMUA_Achr5T28860_001 | EnsemblPlantsGene:GSMUA_Achr5G28860_001 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR32487 |
| PANTHER:PTHR32487:SF7 | SEG:seg | SUPFAM:SSF51735 | UniParc:UPI0002951372 | UniProt:M0T2L0 | MapMan:35.1 |
Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:Projected from Arabidopsis thaliana (AT5G58750) TAIR;Acc:AT5G58750]
Coordinates
chr5:-:28849393..28850842
Molecular Weight (calculated)
45407.8 Da
IEP (calculated)
5.650
GRAVY (calculated)
-0.154
Length
416 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSTAAAAAS GGGGGGIHGD GSAANVALVA GATGLVGREL VTALLLSACS REWKLVYGVA RCPPETDDDG DRHGDRYRFV ACNMLDRDET MAKLGPLGDR
101: VTHVFWVTWA SQFPLNSQEC CDQNRAMISN ALDALLLPSC GGAFRHFALQ TGTKHYTPLE AGGSGSGCFD EDSPRAVGGD VRNFYYVQED LLEERLRGRR
201: ISWSVHRPGL LLGASRRSHF NLVGSLCVYA SICRHLGLPF LFYGNRLCWE EPSLDASDAR LVAQQHIWWA TSSPEGRQGE AFNAINGTAF TWKEVWPLLA
301: AKFGMLPPAV AGTGTSGGDV DAMLEDLVSE RATYVEVMGD KGGAWEEIVE KEGLRSTRME DLANWGFLDA LFGLPFKILA SNAKARRLGF TAIYRTPESL
401: LYWVDRMRED RLIPSW
101: VTHVFWVTWA SQFPLNSQEC CDQNRAMISN ALDALLLPSC GGAFRHFALQ TGTKHYTPLE AGGSGSGCFD EDSPRAVGGD VRNFYYVQED LLEERLRGRR
201: ISWSVHRPGL LLGASRRSHF NLVGSLCVYA SICRHLGLPF LFYGNRLCWE EPSLDASDAR LVAQQHIWWA TSSPEGRQGE AFNAINGTAF TWKEVWPLLA
301: AKFGMLPPAV AGTGTSGGDV DAMLEDLVSE RATYVEVMGD KGGAWEEIVE KEGLRSTRME DLANWGFLDA LFGLPFKILA SNAKARRLGF TAIYRTPESL
401: LYWVDRMRED RLIPSW
001: MGSENGSLMR RNEVDENVAL IFGVTGLVGR EIVKTLLMSK PGWRIYGVAR NPEINSMTKM YNFISCDLLN ASETKQRLSP LQDIVSHVFW VTWSGEFPLD
101: TDECCVQNKT MLMNALDAIL PNAKRLKHFS LQTGMKHYVS LVEETMARGE GSSLYYYSEE CPRKSSGKNF YYVLEDLLKE KITRSSVVWS VQRPGLLMGS
201: SSRTLYNFMG SLCVYGAMCK YLNLPFVFGG TRECWEESYI DGSDSNLVAE QHIFAATSGK VREKGEAFNA INGVGFTWKE IWPEIGKKLG VQVNETTMFD
301: EGFWFGREMV ERKHVWDEIV VKEKLVRTEI EDLANWYFLD ALFRCPFKLL GKREKVDRFG FKRKYRTLDS VLYWIDVMRD EKLIPL
101: TDECCVQNKT MLMNALDAIL PNAKRLKHFS LQTGMKHYVS LVEETMARGE GSSLYYYSEE CPRKSSGKNF YYVLEDLLKE KITRSSVVWS VQRPGLLMGS
201: SSRTLYNFMG SLCVYGAMCK YLNLPFVFGG TRECWEESYI DGSDSNLVAE QHIFAATSGK VREKGEAFNA INGVGFTWKE IWPEIGKKLG VQVNETTMFD
301: EGFWFGREMV ERKHVWDEIV VKEKLVRTEI EDLANWYFLD ALFRCPFKLL GKREKVDRFG FKRKYRTLDS VLYWIDVMRD EKLIPL
Arabidopsis Description
At5g58750 [Source:UniProtKB/TrEMBL;Acc:Q9LUY6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.