Factsheet for GSMUA_Achr3P30170_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
extracellular 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P16440_001	Banana	cytosol	61.96	62.14
TraesCS3A01G506500.1	Wheat	extracellular	47.26	60.52
TraesCS3A01G506400.1	Wheat	extracellular	47.26	60.52
GSMUA_Achr6P24680_001	Banana	golgi	51.87	59.8
Bra010499.1-P	Field mustard	cytosol	65.42	58.21
CDY08911	Canola	cytosol	65.42	58.21
CDY24831	Canola	cytosol	65.42	58.21
EER92090	Sorghum	cytosol	66.28	58.08
Solyc10g049620.1.1	Tomato	plastid	64.84	57.99
Bra013777.1-P	Field mustard	cytosol	64.84	57.69
CDY34267	Canola	cytosol	64.84	57.69
CDY03474	Canola	cytosol	64.27	57.33
Zm00001d029582_P001	Maize	extracellular	65.42	57.32
PGSC0003DMT400013949	Potato	cytosol	63.98	57.22
TraesCS3A01G507400.1	Wheat	golgi	65.42	57.18
TraesCS3B01G575500.1	Wheat	golgi	65.42	57.18
CDY36344	Canola	extracellular	14.12	56.98
Os11t0351555-01	Rice	cytosol	64.55	56.57
Os03t0436400-01	Rice	plasma membrane	64.55	56.57
TraesCS3D01G514300.1	Wheat	plastid	63.98	56.49
TraesCS3A01G506600.1	Wheat	mitochondrion	63.98	56.49
Bra019241.1-P	Field mustard	cytosol	61.67	56.46
CDX92623	Canola	cytosol	61.67	56.32
CDY10994	Canola	cytosol	61.38	56.2
TraesCS3B01G574600.1	Wheat	mitochondrion	63.4	55.98
VIT_03s0091g00450.t01	Wine grape	cytosol	62.54	55.78
AT4G24220.1	Thale cress	cytosol	62.25	55.67
TraesCS3D01G514400.1	Wheat	plastid	63.69	55.67
KRH52063	Soybean	nucleus	61.96	55.41
TraesCS3A01G508600.1	Wheat	cytosol	62.54	55.22
VIT_18s0001g09420.t01	Wine grape	cytosol	61.67	54.87
HORVU3Hr1G111650.1	Barley	cytosol, mitochondrion	63.69	54.7
KRH15431	Soybean	cytosol	10.66	54.41
HORVU0Hr1G007340.1	Barley	plastid	62.25	54.14
HORVU7Hr1G038590.1	Barley	mitochondrion	59.94	53.2
TraesCS7D01G191000.1	Wheat	mitochondrion	60.23	53.18
TraesCS7B01G094800.1	Wheat	mitochondrion	60.23	53.05
EES08251	Sorghum	mitochondrion	62.82	52.78
PGSC0003DMT400025509	Potato	cytosol	57.93	51.8
Solyc10g049600.1.1	Tomato	cytosol	57.35	51.69
Os07t0601600-00	Rice	plasma membrane	60.81	51.46
Zm00001d029581_P001	Maize	cytosol	59.37	51.37
PGSC0003DMT400039098	Potato	cytosol	57.35	51.29
Zm00001d029580_P001	Maize	cytosol	59.08	51.12
HORVU3Hr1G055170.1	Barley	mitochondrion	10.95	45.24
PGSC0003DMT400071398	Potato	cytosol	51.01	44.7
OQU92343	Sorghum	golgi	49.28	43.85
Solyc01g091670.2.1	Tomato	cytosol	48.7	43.11
Os03t0422600-00	Rice	mitochondrion	33.72	42.86
GSMUA_Achr5P28860_001	Banana	plastid	36.02	30.05

Protein Annotations

EnsemblPlants:GSMUA_Achr3P30170_001	EnsemblPlants:GSMUA_Achr3T30170_001	EnsemblPlantsGene:GSMUA_Achr3G30170_001	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR32487
PANTHER:PTHR32487:SF10	SEG:seg	SUPFAM:SSF51735	UniParc:UPI000296BEE7	UniProt:M0SJ33	MapMan:35.1

Description

NAD dependent epimerase/dehydratase family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G30170_001]

Coordinates

chr3:+:29018408..29019828

Molecular Weight (calculated)

38475.4 Da

IEP (calculated)

5.564

GRAVY (calculated)

-0.196

Length

347 amino acids

Sequence
(BLAST)

001: MSWWWAGAIG AAKKKTTGDD ADAPAARYQS VALVVGATGI VGSSLYDILP LADTPGGPWK LSPLGDVTHI FYAAWCRRST AAETRATNAA MLRNVLDAVL
101: PAAPNLQHVC LQTGRNHYLG PYGPAGGVVA EVGPRHDPPH DPPFPENTPR LAIPNFYYEL EDVLLEELAK KERAVTWSVH RPTTIFGFSP CSLMNLVCSL
201: CVYASICRKE GVPLRWFGSE EAWYGFSDAS DADLVAEHQI WAAVDPYAKN EAFNCSNGDV FKWKHLWPDA MKGKEAVWED IVRENELVPT ALDEVGHWWY
301: ADAVLGLEFE HLDNMNKSKE HGFLGFRNSV TSFNTWIDKL RAYKVVP

Best Arabidopsis Sequence Match ( AT4G24220.1 )
(BLAST)

001: MSWWWAGAIG AAKKKLDEDE PSQSFESVAL IIGVTGIVGN SLAEILPLSD TPGGPWKVYG VARRPRPTWN ADHPIDYIQC DVSDAEDTRS KLSPLTDVTH
101: VFYVTWTNRE SESENCEANG SMLRNVLQAI IPYAPNLRHV CLQTGTKHYL GPFTNVDGPR HDPPFTEDMP RLQIQNFYYT QEDILFEEIK KIETVTWSIH
201: RPNMIFGFSP YSLMNIVGTL CVYAAICKHE GSPLLFPGSK KAWEGFMTAS DADLIAEQQI WAAVDPYAKN EAFNCNNADI FKWKHLWKIL AEQFGIEEYG
301: FEEGKNLGLV EMMKGKERVW EEMVKENQLQ EKKLEEVGVW WFADVILGVE GMIDSMNKSK EYGFLGFRNS NNSFISWIDK YKAFKIVP

Arabidopsis Description

VEP13-oxo-Delta(4,5)-steroid 5-beta-reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9STX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.