Factsheet for PGSC0003DMT400025509

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g049600.1.1	Tomato	cytosol	91.75	92.47
PGSC0003DMT400039098	Potato	cytosol	89.95	89.95
PGSC0003DMT400013949	Potato	cytosol	79.38	79.38
VIT_18s0001g09420.t01	Wine grape	cytosol	71.39	71.03
KRH52063	Soybean	nucleus	70.62	70.62
AT4G24220.1	Thale cress	cytosol	69.85	69.85
CDY03474	Canola	cytosol	69.33	69.15
CDY34267	Canola	cytosol	69.33	68.97
Bra013777.1-P	Field mustard	cytosol	69.33	68.97
CDY08911	Canola	cytosol	68.3	67.95
CDY24831	Canola	cytosol	68.3	67.95
Bra010499.1-P	Field mustard	cytosol	68.3	67.95
Bra019241.1-P	Field mustard	cytosol	63.66	65.17
CDX92623	Canola	cytosol	63.66	65.0
CDY10994	Canola	cytosol	63.4	64.91
KRH15431	Soybean	cytosol	10.82	61.76
GSMUA_Achr4P16440_001	Banana	cytosol	54.64	61.27
GSMUA_Achr6P24680_001	Banana	golgi	45.1	58.14
GSMUA_Achr3P30170_001	Banana	cytosol	51.8	57.93
Os03t0436400-01	Rice	plasma membrane	56.19	55.05
Os11t0351555-01	Rice	cytosol	56.19	55.05
Zm00001d029582_P001	Maize	extracellular	56.19	55.05
TraesCS3B01G575500.1	Wheat	golgi	56.19	54.91
TraesCS3A01G507400.1	Wheat	golgi	56.19	54.91
TraesCS3D01G514300.1	Wheat	plastid	55.41	54.71
CDY36344	Canola	extracellular	12.11	54.65
PGSC0003DMT400071398	Potato	cytosol	55.67	54.55
TraesCS3A01G506600.1	Wheat	mitochondrion	55.15	54.45
EER92090	Sorghum	cytosol	55.15	54.04
TraesCS3A01G506400.1	Wheat	extracellular	37.63	53.87
TraesCS3A01G506500.1	Wheat	extracellular	37.63	53.87
TraesCS3B01G574600.1	Wheat	mitochondrion	54.38	53.69
TraesCS3A01G508600.1	Wheat	cytosol	54.38	53.69
TraesCS3D01G514400.1	Wheat	plastid	54.64	53.4
HORVU3Hr1G111650.1	Barley	cytosol, mitochondrion	55.41	53.22
Zm00001d029580_P001	Maize	cytosol	53.61	51.87
HORVU0Hr1G007340.1	Barley	plastid	53.09	51.63
Zm00001d029581_P001	Maize	cytosol	53.09	51.37
EES08251	Sorghum	mitochondrion	54.38	51.09
HORVU7Hr1G038590.1	Barley	mitochondrion	50.77	50.38
TraesCS7D01G191000.1	Wheat	mitochondrion	50.77	50.13
TraesCS7B01G094800.1	Wheat	mitochondrion	50.77	50.0
Os07t0601600-00	Rice	plasma membrane	52.58	49.76
Os03t0422600-00	Rice	mitochondrion	32.73	46.52
OQU92343	Sorghum	golgi	43.3	43.08
HORVU3Hr1G055170.1	Barley	mitochondrion	7.47	34.52

Protein Annotations

EnsemblPlants:PGSC0003DMT400025509	EnsemblPlantsGene:PGSC0003DMG400009850	EntrezGene:102593127	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR32487
PANTHER:PTHR32487:SF0	PGSC:PGSC0003DMG400009850	RefSeq:XP_006366601.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI00029504C4
UniProt:M1ALI6	MapMan:35.1	:	:	:	:

Description

Progesterone 5-beta-reductase [Source:PGSC_GENE;Acc:PGSC0003DMG400009850]

Coordinates

chr10:+:12201791..12210430

Molecular Weight (calculated)

44197.6 Da

IEP (calculated)

4.998

GRAVY (calculated)

-0.260

Length

388 amino acids

Sequence
(BLAST)

001: MSWWWSGAIG AAKKKFEEDD VPQNFQSVAL IIGVTGIVGN SLAEILPCAD TPGGPWKVYG VARRPRPSWN VDHPIEYIQC DISNKEEAQS KLTLLTDVTH
101: VFYVTWANRP TEVENCEING KMFQNVLDAI IPNCPNLSHI CLQTGLKHYH GSFELFGKVA HDTPYHEGLP RLPVTIFYYT QEDILFEEVK KKEGLTWSIH
201: RPGLIFGFSP YSMMNIIGTL CVYAAICKHE GLPLRFPGSK SAWDGYSICS DADLIAEQHI WASVDPNAKN EAFNISNGDV FKWKHLWEGL AEEFEVEIEE
301: FDENKRWTLE EMMKDKGQIW DGIVKENGLV ESKLEEIGGW WFVDLVLNEE CPLDTMNKSK EHGFLGFRNS KNAFISWIYK IKACKIVP

Best Arabidopsis Sequence Match ( AT4G24220.1 )
(BLAST)

001: MSWWWAGAIG AAKKKLDEDE PSQSFESVAL IIGVTGIVGN SLAEILPLSD TPGGPWKVYG VARRPRPTWN ADHPIDYIQC DVSDAEDTRS KLSPLTDVTH
101: VFYVTWTNRE SESENCEANG SMLRNVLQAI IPYAPNLRHV CLQTGTKHYL GPFTNVDGPR HDPPFTEDMP RLQIQNFYYT QEDILFEEIK KIETVTWSIH
201: RPNMIFGFSP YSLMNIVGTL CVYAAICKHE GSPLLFPGSK KAWEGFMTAS DADLIAEQQI WAAVDPYAKN EAFNCNNADI FKWKHLWKIL AEQFGIEEYG
301: FEEGKNLGLV EMMKGKERVW EEMVKENQLQ EKKLEEVGVW WFADVILGVE GMIDSMNKSK EYGFLGFRNS NNSFISWIDK YKAFKIVP

Arabidopsis Description

VEP13-oxo-Delta(4,5)-steroid 5-beta-reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9STX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.