Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 1
- plastid 4
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0422600-00 | Rice | mitochondrion | 49.27 | 73.99 |
| EES08251 | Sorghum | mitochondrion | 72.68 | 72.16 |
| Os11t0351555-01 | Rice | cytosol | 68.54 | 70.96 |
| Os03t0436400-01 | Rice | plasma membrane | 68.54 | 70.96 |
| Zm00001d029580_P001 | Maize | cytosol | 66.59 | 68.08 |
| Zm00001d029581_P001 | Maize | cytosol | 66.1 | 67.58 |
| HORVU7Hr1G038590.1 | Barley | mitochondrion | 61.22 | 64.19 |
| GSMUA_Achr4P16440_001 | Banana | cytosol | 53.41 | 63.29 |
| TraesCS7B01G094800.1 | Wheat | mitochondrion | 60.73 | 63.2 |
| TraesCS7D01G191000.1 | Wheat | mitochondrion | 60.49 | 63.1 |
| GSMUA_Achr3P30170_001 | Banana | cytosol | 51.46 | 60.81 |
| GSMUA_Achr6P24680_001 | Banana | golgi | 44.39 | 60.47 |
| CDY03474 | Canola | cytosol | 55.37 | 58.35 |
| KRH52063 | Soybean | nucleus | 55.12 | 58.25 |
| CDY34267 | Canola | cytosol | 55.37 | 58.21 |
| Bra013777.1-P | Field mustard | cytosol | 55.37 | 58.21 |
| CDY08911 | Canola | cytosol | 54.39 | 57.18 |
| CDX92623 | Canola | cytosol | 52.93 | 57.11 |
| Bra010499.1-P | Field mustard | cytosol | 54.15 | 56.92 |
| CDY24831 | Canola | cytosol | 54.15 | 56.92 |
| AT4G24220.1 | Thale cress | cytosol | 53.66 | 56.7 |
| Bra019241.1-P | Field mustard | cytosol | 51.95 | 56.2 |
| CDY10994 | Canola | cytosol | 51.71 | 55.94 |
| PGSC0003DMT400013949 | Potato | cytosol | 52.93 | 55.93 |
| Solyc10g049620.1.1 | Tomato | plastid | 52.68 | 55.67 |
| VIT_18s0001g09420.t01 | Wine grape | cytosol | 51.46 | 54.1 |
| Solyc10g049600.1.1 | Tomato | cytosol | 50.73 | 54.03 |
| VIT_03s0091g00450.t01 | Wine grape | cytosol | 50.73 | 53.47 |
| PGSC0003DMT400025509 | Potato | cytosol | 49.76 | 52.58 |
| PGSC0003DMT400039098 | Potato | cytosol | 48.29 | 51.03 |
| CDY36344 | Canola | extracellular | 10.0 | 47.67 |
| PGSC0003DMT400071398 | Potato | cytosol | 45.85 | 47.47 |
| KRH15431 | Soybean | cytosol | 7.8 | 47.06 |
| Solyc01g091670.2.1 | Tomato | cytosol | 44.15 | 46.17 |
Protein Annotations
| EnsemblPlants:Os07t0601600-00 | EnsemblPlantsGene:Os07g0601600 | EntrezGene:4343823 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR32487 |
| PANTHER:PTHR32487:SF10 | ProteinID:BAC20032.1 | ProteinID:BAF22115.2 | ProteinID:BAT02524.1 | RefSeq:XP_015645334.1 | SEG:seg |
| SUPFAM:SSF51735 | UniParc:UPI00000AD6EA | UniProt:Q8H4F1 | MapMan:35.1 | : | : |
Description
Similar to VEP1 (VEIN PATTERNING 1); binding / catalytic. (Os07t0601600-00)
Coordinates
chr7:+:24555174..24556440
Molecular Weight (calculated)
44814.3 Da
IEP (calculated)
6.059
GRAVY (calculated)
-0.073
Length
410 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPMSMSWWW AGAIGAARKR HDGGGGEQQP PFRSVALVVG STGIVGTSLV DILPLPDTPG GPWKVYALSR RPPPPWSPPP PAAVTHLCVD LADAAAVAEA
101: LAPLTDITHV FYVALAAPHL AEARSREANA GMLRNVLAAV VPTCPALAHV ALQTGSKHYI GPPESIGKLP VETPFSEDMP RHDYPNFYYD QEDVLFDAVT
201: SSSSSSSSRR AAAVTWSVHR PSLIFGFSPR SAMNVVCSLC VYAAICRKER RELRWPGSLG AWEGFSNASD ADLVAEQQIW AAVADAAAKN EAFNCSNGDI
301: YKWKQLWPVL AGKFGVEWAG YEGEERRVGL TAAMAGKEAV WAEIVAEEKL VATELGEVAN WWFVDALFMD KWEFVDTMNK SKEHGFLGFR NTLRSFEAWI
401: DKMKLYRIVP
101: LAPLTDITHV FYVALAAPHL AEARSREANA GMLRNVLAAV VPTCPALAHV ALQTGSKHYI GPPESIGKLP VETPFSEDMP RHDYPNFYYD QEDVLFDAVT
201: SSSSSSSSRR AAAVTWSVHR PSLIFGFSPR SAMNVVCSLC VYAAICRKER RELRWPGSLG AWEGFSNASD ADLVAEQQIW AAVADAAAKN EAFNCSNGDI
301: YKWKQLWPVL AGKFGVEWAG YEGEERRVGL TAAMAGKEAV WAEIVAEEKL VATELGEVAN WWFVDALFMD KWEFVDTMNK SKEHGFLGFR NTLRSFEAWI
401: DKMKLYRIVP
001: MSWWWAGAIG AAKKKLDEDE PSQSFESVAL IIGVTGIVGN SLAEILPLSD TPGGPWKVYG VARRPRPTWN ADHPIDYIQC DVSDAEDTRS KLSPLTDVTH
101: VFYVTWTNRE SESENCEANG SMLRNVLQAI IPYAPNLRHV CLQTGTKHYL GPFTNVDGPR HDPPFTEDMP RLQIQNFYYT QEDILFEEIK KIETVTWSIH
201: RPNMIFGFSP YSLMNIVGTL CVYAAICKHE GSPLLFPGSK KAWEGFMTAS DADLIAEQQI WAAVDPYAKN EAFNCNNADI FKWKHLWKIL AEQFGIEEYG
301: FEEGKNLGLV EMMKGKERVW EEMVKENQLQ EKKLEEVGVW WFADVILGVE GMIDSMNKSK EYGFLGFRNS NNSFISWIDK YKAFKIVP
101: VFYVTWTNRE SESENCEANG SMLRNVLQAI IPYAPNLRHV CLQTGTKHYL GPFTNVDGPR HDPPFTEDMP RLQIQNFYYT QEDILFEEIK KIETVTWSIH
201: RPNMIFGFSP YSLMNIVGTL CVYAAICKHE GSPLLFPGSK KAWEGFMTAS DADLIAEQQI WAAVDPYAKN EAFNCNNADI FKWKHLWKIL AEQFGIEEYG
301: FEEGKNLGLV EMMKGKERVW EEMVKENQLQ EKKLEEVGVW WFADVILGVE GMIDSMNKSK EYGFLGFRNS NNSFISWIDK YKAFKIVP
Arabidopsis Description
VEP13-oxo-Delta(4,5)-steroid 5-beta-reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9STX2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.