Factsheet for VIT_03s0091g00450.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0001g09420.t01	Wine grape	cytosol	71.98	71.79
GSMUA_Achr4P16440_001	Banana	cytosol	55.78	62.72
GSMUA_Achr3P30170_001	Banana	cytosol	55.78	62.54
GSMUA_Achr6P24680_001	Banana	golgi	45.24	58.47
TraesCS3A01G506500.1	Wheat	extracellular	40.62	58.3
TraesCS3A01G506400.1	Wheat	extracellular	40.62	58.3
Zm00001d029582_P001	Maize	extracellular	58.87	57.83
TraesCS3B01G575500.1	Wheat	golgi	58.61	57.43
TraesCS3A01G507400.1	Wheat	golgi	58.35	57.18
Os03t0436400-01	Rice	plasma membrane	58.1	57.07
Os11t0351555-01	Rice	cytosol	58.1	57.07
EER92090	Sorghum	cytosol	57.84	56.82
TraesCS3D01G514300.1	Wheat	plastid	57.07	56.49
TraesCS3A01G506600.1	Wheat	mitochondrion	56.81	56.23
TraesCS3B01G574600.1	Wheat	mitochondrion	56.56	55.98
HORVU3Hr1G111650.1	Barley	cytosol, mitochondrion	58.1	55.94
TraesCS3D01G514400.1	Wheat	plastid	56.3	55.16
TraesCS3A01G508600.1	Wheat	cytosol	55.53	54.96
HORVU0Hr1G007340.1	Barley	plastid	55.01	53.63
Zm00001d029581_P001	Maize	cytosol	55.01	53.37
Zm00001d029580_P001	Maize	cytosol	54.76	53.12
EES08251	Sorghum	mitochondrion	55.78	52.54
HORVU7Hr1G038590.1	Barley	mitochondrion	51.67	51.41
TraesCS7D01G191000.1	Wheat	mitochondrion	51.41	50.89
TraesCS7B01G094800.1	Wheat	mitochondrion	51.41	50.76
Os07t0601600-00	Rice	plasma membrane	53.47	50.73
Os03t0422600-00	Rice	mitochondrion	33.93	48.35
OQU92343	Sorghum	golgi	42.93	42.82
VIT_05s0077g01300.t01	Wine grape	endoplasmic reticulum, extracellular, peroxisome	41.39	42.82
VIT_05s0077g01310.t01	Wine grape	cytosol	41.65	42.74
HORVU3Hr1G055170.1	Barley	mitochondrion	8.23	38.1

Protein Annotations

EntrezGene:100264565	wikigene:100264565	Gene3D:3.40.50.720	MapMan:35.1	ProteinID:CCB47717	ProteinID:CCB47717.1
UniProt:F6H675	EMBL:FN595242	EntrezGene:LOC100264565	wikigene:LOC100264565	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR32487
PANTHER:PTHR32487:SF0	SUPFAM:SSF51735	TIGR:TC63795	UniParc:UPI0001982E0D	ArrayExpress:VIT_03s0091g00450	EnsemblPlantsGene:VIT_03s0091g00450
EnsemblPlants:VIT_03s0091g00450.t01	unigene:Vvi.15952	RefSeq:XP_002272271	RefSeq:XP_002272271.1	RefSeq:XP_002272349	RefSeq:XP_002272349.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3:+:6811798..6813280

Molecular Weight (calculated)

44080.3 Da

IEP (calculated)

5.723

GRAVY (calculated)

-0.348

Length

389 amino acids

Sequence
(BLAST)

001: MSWWWSGAIG AAKRKLQEDE AHPTNYQGVG LIVGVTGIVG NSLAEILPLR DTPGGPWKVY GVARRPQPAW NADNCVEYIQ CDVFDPEETS SKLSKLTDVT
101: HIFYVTWANM GSEAENCRVN GDMFRNVLSA VIPNAPNLQH ICLQTGRKHY IGPFEALGKI EPHDPPYHEE MPRLDVENFY HVQEDILFEE VRKKEGLTWS
201: VHRPGVIFGF SPYSMMNAIG TLCVYATICK HEGLPLRFPG TQDTWNGYWD VSDADLIAEH HIWAAVDPFA KNEAFNCSNG DVFKWKHLWK VLAEQFGLEF
301: HEPEGQGLSL EKMMKDKGPV WDEIVREKGL VPTKLEEVGQ WWFADVVLSA GSSLDSMNKS KEHGFLGFRN SKSSFLSWID KMKAYKFVP

Best Arabidopsis Sequence Match ( AT4G24220.1 )
(BLAST)

001: MSWWWAGAIG AAKKKLDEDE PSQSFESVAL IIGVTGIVGN SLAEILPLSD TPGGPWKVYG VARRPRPTWN ADHPIDYIQC DVSDAEDTRS KLSPLTDVTH
101: VFYVTWTNRE SESENCEANG SMLRNVLQAI IPYAPNLRHV CLQTGTKHYL GPFTNVDGPR HDPPFTEDMP RLQIQNFYYT QEDILFEEIK KIETVTWSIH
201: RPNMIFGFSP YSLMNIVGTL CVYAAICKHE GSPLLFPGSK KAWEGFMTAS DADLIAEQQI WAAVDPYAKN EAFNCNNADI FKWKHLWKIL AEQFGIEEYG
301: FEEGKNLGLV EMMKGKERVW EEMVKENQLQ EKKLEEVGVW WFADVILGVE GMIDSMNKSK EYGFLGFRNS NNSFISWIDK YKAFKIVP

Arabidopsis Description

VEP13-oxo-Delta(4,5)-steroid 5-beta-reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9STX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.