Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 3
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_05s0077g01300.t01 | Wine grape | endoplasmic reticulum, extracellular, peroxisome | 82.85 | 83.51 |
| KRH50766 | Soybean | endoplasmic reticulum, plastid | 65.96 | 66.84 |
| VIT_18s0001g09420.t01 | Wine grape | cytosol | 44.85 | 43.59 |
| VIT_03s0091g00450.t01 | Wine grape | cytosol | 42.74 | 41.65 |
Protein Annotations
| ArrayExpress:VIT_05s0077g01310 | EMBL:FN595246 | EnsemblPlants:VIT_05s0077g01310.t01 | EnsemblPlantsGene:VIT_05s0077g01310 | EntrezGene:100265432 | EntrezGene:LOC100265432 |
| Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR32487 | PANTHER:PTHR32487:SF5 | ProteinID:CCB47990 | ProteinID:CCB47990.1 |
| RefSeq:XP_002276059 | RefSeq:XP_002276059.2 | RefSeq:XP_010649532.1 | SEG:seg | SUPFAM:SSF51735 | UniParc:UPI0001983277 |
| UniProt:F6H742 | wikigene:100265432 | wikigene:LOC100265432 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr5:-:1071487..1073008
Molecular Weight (calculated)
42548.7 Da
IEP (calculated)
6.699
GRAVY (calculated)
-0.138
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSETSHGSV ALIVGVTGMV GLSLAEALKK PRALGGPWKV YGAARRPKPT WFPTSNVDDY IAFDAVNPDD TRAKLSPISH EVTHVFWVAI QVRETEELNV
101: TVNAAMLSNV LGVLKSVPSS RLRHLTLQTG TQHYIGPLHD PNHSGQLPCP ETPFREDSAR LPFPNFYYAL EDLIASYSPS LSYSIHRSSI ILGASSRSAY
201: NALLTLAAYA AICKHESLPF RYPGTRYTWE HFCDMSDARL LAEQQIWAGV SEKAKNQAFN CVNGDVFTWK SMWKVVCEVF DVEFVEFDES QEFDFVGMMS
301: GKGKVWESIV KKYGLYETKL EEITCFAALK TVLHMEFQHV CSMNKSRNFG WFGHVDTLQS VGTWVERLRV MKIIPATTD
101: TVNAAMLSNV LGVLKSVPSS RLRHLTLQTG TQHYIGPLHD PNHSGQLPCP ETPFREDSAR LPFPNFYYAL EDLIASYSPS LSYSIHRSSI ILGASSRSAY
201: NALLTLAAYA AICKHESLPF RYPGTRYTWE HFCDMSDARL LAEQQIWAGV SEKAKNQAFN CVNGDVFTWK SMWKVVCEVF DVEFVEFDES QEFDFVGMMS
301: GKGKVWESIV KKYGLYETKL EEITCFAALK TVLHMEFQHV CSMNKSRNFG WFGHVDTLQS VGTWVERLRV MKIIPATTD
001: MSWWWAGAIG AAKKLDEDEP SQSFESVALI IGVTGIVGNS LAEILPLSDT PGGPWKVYGV ARRPRPTWNA DHPIDYIQCD VSDAEDTRSK LSPLTDVTHV
101: FYVTWTNRES ESENCEANGS MLRNVLQAII PYAPNLRHVC LQTGTKHYLG PFTNVDGPRH DPPFTEDMPR LQIQNFYYTQ EDILFEEIKK IETVTWSIHR
201: PNMIFGFSPY SLMNIVGTLC VYAAICKHEG SPLLFPGSKK AWEGFMTASD ADLIAEQQIW AAVDPYAKNE AFNCNNADIF KWKHLWKILA EQFGIEEYGF
301: EEGKNLGLVE MMKGKERVWE EMVKENQLQE KKLEEVGVWW FADVILGVEG MIDSMNKSKE YGFLGFRNSN NSFISWIDKY KAFKIVP
101: FYVTWTNRES ESENCEANGS MLRNVLQAII PYAPNLRHVC LQTGTKHYLG PFTNVDGPRH DPPFTEDMPR LQIQNFYYTQ EDILFEEIKK IETVTWSIHR
201: PNMIFGFSPY SLMNIVGTLC VYAAICKHEG SPLLFPGSKK AWEGFMTASD ADLIAEQQIW AAVDPYAKNE AFNCNNADIF KWKHLWKILA EQFGIEEYGF
301: EEGKNLGLVE MMKGKERVWE EMVKENQLQE KKLEEVGVWW FADVILGVEG MIDSMNKSKE YGFLGFRNSN NSFISWIDKY KAFKIVP
Arabidopsis Description
VEP13-oxo-Delta(4,5)-steroid 5-beta-reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9STX2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.