Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 2
- golgi 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_05s0077g01310.t01 | Wine grape | cytosol | 83.51 | 82.85 |
| KRH50766 | Soybean | endoplasmic reticulum, plastid | 66.49 | 66.84 |
| VIT_18s0001g09420.t01 | Wine grape | cytosol | 44.15 | 42.56 |
| VIT_03s0091g00450.t01 | Wine grape | cytosol | 42.82 | 41.39 |
Protein Annotations
| ArrayExpress:VIT_05s0077g01300 | EMBL:FN595246 | EnsemblPlants:VIT_05s0077g01300.t01 | EnsemblPlantsGene:VIT_05s0077g01300 | EntrezGene:100260215 | EntrezGene:LOC100260215 |
| Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR32487 | PANTHER:PTHR32487:SF5 | ProteinID:CCB47989 | ProteinID:CCB47989.1 |
| RefSeq:XP_002276159 | RefSeq:XP_002276159.1 | SEG:seg | SUPFAM:SSF51735 | TIGR:TC64689 | unigene:Vvi.9541 |
| UniParc:UPI0001983278 | UniProt:F6H741 | wikigene:100260215 | wikigene:LOC100260215 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr5:-:1067543..1068826
Molecular Weight (calculated)
42623.0 Da
IEP (calculated)
6.571
GRAVY (calculated)
-0.068
Length
376 amino acids
Sequence
(BLAST)
(BLAST)
001: MELDQIPHAS VALIVGVTGM AGLSLAEALK KPSASGSPWK VYGAARRPQP TWFPISIVDH YMTFDAVCSD DTRAKLSPIS NEVTHVFWVA IQVRETEELN
101: ITVNAAMLSN VLEVFKSAPS SRLQHVTLQT GTKHYMGPIF YPEKSKQLTA PETPFREDFP RLPFPNFYYA LEDLLASHTP SFTYSVHRSS IIIGASSRST
201: YNALLTLAVY AAICKHEGLP FRYPGTRYTW DHFCDMSDAR VLAEQQIWAA VSEKAKNQAF NCVNGDIFTW KSMWKVVCEV FEVEFVEFDE SQEFDFVGMM
301: SEKGKVWESI VKKHGLYESK LEEITCFAAL KAVLHFEFQH VCSMNKSRSF GWFGHVDTLQ SIGIWVERLR VMNIIP
101: ITVNAAMLSN VLEVFKSAPS SRLQHVTLQT GTKHYMGPIF YPEKSKQLTA PETPFREDFP RLPFPNFYYA LEDLLASHTP SFTYSVHRSS IIIGASSRST
201: YNALLTLAVY AAICKHEGLP FRYPGTRYTW DHFCDMSDAR VLAEQQIWAA VSEKAKNQAF NCVNGDIFTW KSMWKVVCEV FEVEFVEFDE SQEFDFVGMM
301: SEKGKVWESI VKKHGLYESK LEEITCFAAL KAVLHFEFQH VCSMNKSRSF GWFGHVDTLQ SIGIWVERLR VMNIIP
001: MSWWWAGAIG AAKKKLDEDE PSQSFESVAL IIGVTGIVGN SLAEILPLSD TPGGPWKVYG VARRPRPTWN ADHPIDYIQC DVSDAEDTRS KLSPLTDVTH
101: VFYVTWTNRE SESENCEANG SMLRNVLQAI IPYAPNLRHV CLQTGTKHYL GPFTNVDGPR HDPPFTEDMP RLQIQNFYYT QEDILFEEIK KIETVTWSIH
201: RPNMIFGFSP YSLMNIVGTL CVYAAICKHE GSPLLFPGSK KAWEGFMTAS DADLIAEQQI WAAVDPYAKN EAFNCNNADI FKWKHLWKIL AEQFGIEEYG
301: FEEGKNLGLV EMMKGKERVW EEMVKENQLQ EKKLEEVGVW WFADVILGVE GMIDSMNKSK EYGFLGFRNS NNSFISWIDK YKAFKIVP
101: VFYVTWTNRE SESENCEANG SMLRNVLQAI IPYAPNLRHV CLQTGTKHYL GPFTNVDGPR HDPPFTEDMP RLQIQNFYYT QEDILFEEIK KIETVTWSIH
201: RPNMIFGFSP YSLMNIVGTL CVYAAICKHE GSPLLFPGSK KAWEGFMTAS DADLIAEQQI WAAVDPYAKN EAFNCNNADI FKWKHLWKIL AEQFGIEEYG
301: FEEGKNLGLV EMMKGKERVW EEMVKENQLQ EKKLEEVGVW WFADVILGVE GMIDSMNKSK EYGFLGFRNS NNSFISWIDK YKAFKIVP
Arabidopsis Description
VEP13-oxo-Delta(4,5)-steroid 5-beta-reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9STX2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.