Factsheet for TraesCS3D01G514400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G506600.1	Wheat	mitochondrion	94.46	95.42
TraesCS3D01G514300.1	Wheat	plastid	88.41	89.31
Os11t0351555-01	Rice	cytosol	82.37	82.58
Os03t0436400-01	Rice	plasma membrane	82.37	82.58
Zm00001d029582_P001	Maize	extracellular	80.86	81.06
EER92090	Sorghum	cytosol	80.86	81.06
TraesCS7D01G191000.1	Wheat	mitochondrion	67.25	67.94
GSMUA_Achr4P16440_001	Banana	cytosol	57.43	65.9
GSMUA_Achr3P30170_001	Banana	cytosol	55.67	63.69
GSMUA_Achr6P24680_001	Banana	golgi	46.35	61.13
KRH52063	Soybean	nucleus	58.19	59.54
CDY34267	Canola	cytosol	57.93	58.97
Bra013777.1-P	Field mustard	cytosol	57.93	58.97
CDY03474	Canola	cytosol	57.68	58.87
AT4G24220.1	Thale cress	cytosol	56.17	57.47
CDY08911	Canola	cytosol	56.42	57.44
Bra010499.1-P	Field mustard	cytosol	56.17	57.18
CDY24831	Canola	cytosol	56.17	57.18
PGSC0003DMT400013949	Potato	cytosol	55.67	56.96
VIT_18s0001g09420.t01	Wine grape	cytosol	55.92	56.92
Solyc10g049620.1.1	Tomato	plastid	55.42	56.7
Solyc10g049600.1.1	Tomato	cytosol	54.66	56.36
VIT_03s0091g00450.t01	Wine grape	cytosol	55.16	56.3
CDY10994	Canola	cytosol	53.15	55.67
CDX92623	Canola	cytosol	53.15	55.53
Bra019241.1-P	Field mustard	cytosol	52.9	55.41
PGSC0003DMT400025509	Potato	cytosol	53.4	54.64
PGSC0003DMT400039098	Potato	cytosol	52.64	53.87
KRH15431	Soybean	cytosol	8.56	50.0
CDY36344	Canola	extracellular	10.83	50.0
PGSC0003DMT400071398	Potato	cytosol	46.1	46.21
Solyc01g091670.2.1	Tomato	cytosol	43.83	44.39

Protein Annotations

EnsemblPlants:TraesCS3D01G514400.1	EnsemblPlantsGene:TraesCS3D01G514400	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR32487	PANTHER:PTHR32487:SF10	PFAM:PF01370
SEG:seg	SUPFAM:SSF51735	TIGR:cd08948	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr3D:+:598060797..598062191

Molecular Weight (calculated)

43824.0 Da

IEP (calculated)

4.844

GRAVY (calculated)

-0.061

Length

397 amino acids

Sequence
(BLAST)

001: MTSAMSWWWA GAVGAVKKSQ DESAASSFQS VALVVGSTGI VGTSLVDILP RQDTPGGPWK VYAVSRRPLP PWCPPPSPAV THLQIDLADP AAVAEALTPL
101: ADITHVFYAA WSSHPTEAQN REANSAMLRN VLSVVVPGCP ALAHVCLQTG RKHYVGPFEA VGKLGVPDPP YTEDMPRLDY PNFYYDLEDT LLDEVSCRDG
201: AVSWSVHRPS VVFGFSARSA MNIVASLCVY AAICRKEGAV LRWPGCRVAW EGFSDASDAD LIAEHEIWAA VHPLAKNEAF NCSNGDVFKW KQLWPMLADR
301: FGVEWAGYEG EDNRFVLADA MAGKEPVWAE ILRENELITT ELQEIANWWF VDAMFNVEIE HLDSMNKSKE HGFLGFRNTA NSFNAWIDKM KVLKIVP

Best Arabidopsis Sequence Match ( AT5G58750.1 )
(BLAST)

001: MGSENGSLMR RNEVDENVAL IFGVTGLVGR EIVKTLLMSK PGWRIYGVAR NPEINSMTKM YNFISCDLLN ASETKQRLSP LQDIVSHVFW VTWSGEFPLD
101: TDECCVQNKT MLMNALDAIL PNAKRLKHFS LQTGMKHYVS LVEETMARGE GSSLYYYSEE CPRKSSGKNF YYVLEDLLKE KITRSSVVWS VQRPGLLMGS
201: SSRTLYNFMG SLCVYGAMCK YLNLPFVFGG TRECWEESYI DGSDSNLVAE QHIFAATSGK VREKGEAFNA INGVGFTWKE IWPEIGKKLG VQVNETTMFD
301: EGFWFGREMV ERKHVWDEIV VKEKLVRTEI EDLANWYFLD ALFRCPFKLL GKREKVDRFG FKRKYRTLDS VLYWIDVMRD EKLIPL

Arabidopsis Description

At5g58750 [Source:UniProtKB/TrEMBL;Acc:Q9LUY6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.