CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34267	Canola	cytosol	97.17	96.92
CDY24831	Canola	cytosol	89.97	89.74
CDY08911	Canola	cytosol	89.72	89.49
AT4G24220.1	Thale cress	cytosol	88.69	88.92
CDY10994	Canola	cytosol	80.46	82.59
CDX92623	Canola	cytosol	79.43	81.32
Solyc10g049620.1.1	Tomato	plastid	74.81	75.0
KRH52063	Soybean	nucleus	74.81	75.0
PGSC0003DMT400013949	Potato	cytosol	73.78	73.97
VIT_18s0001g09420.t01	Wine grape	cytosol	71.72	71.54
CDY36344	Canola	extracellular	15.42	69.77
PGSC0003DMT400025509	Potato	cytosol	69.15	69.33
Solyc10g049600.1.1	Tomato	cytosol	67.35	68.05
PGSC0003DMT400039098	Potato	cytosol	67.61	67.78
GSMUA_Achr4P16440_001	Banana	cytosol	58.87	66.19
GSMUA_Achr3P30170_001	Banana	cytosol	57.33	64.27
KRH15431	Soybean	cytosol	11.05	63.24
Zm00001d029582_P001	Maize	extracellular	61.7	60.61
GSMUA_Achr6P24680_001	Banana	golgi	46.79	60.47
Os03t0436400-01	Rice	plasma membrane	61.18	60.1
Os11t0351555-01	Rice	cytosol	61.18	60.1
EER92090	Sorghum	cytosol	60.93	59.85
TraesCS3A01G507400.1	Wheat	golgi	60.41	59.19
TraesCS3A01G506500.1	Wheat	extracellular	41.13	59.04
TraesCS3A01G506400.1	Wheat	extracellular	41.13	59.04
TraesCS3B01G575500.1	Wheat	golgi	59.9	58.69
TraesCS3D01G514300.1	Wheat	plastid	59.13	58.52
TraesCS3A01G506600.1	Wheat	mitochondrion	59.13	58.52
TraesCS3D01G514400.1	Wheat	plastid	58.87	57.68
TraesCS3B01G574600.1	Wheat	mitochondrion	58.1	57.51
TraesCS3A01G508600.1	Wheat	cytosol	57.84	57.25
HORVU3Hr1G111650.1	Barley	cytosol, mitochondrion	59.38	57.18
EES08251	Sorghum	mitochondrion	60.15	56.66
PGSC0003DMT400071398	Potato	cytosol	56.81	55.81
Zm00001d029580_P001	Maize	cytosol	57.33	55.61
HORVU0Hr1G007340.1	Barley	plastid	56.81	55.39
Os07t0601600-00	Rice	plasma membrane	58.35	55.37
Solyc01g091670.2.1	Tomato	cytosol	55.53	55.1
TraesCS7D01G191000.1	Wheat	mitochondrion	55.27	54.71
Zm00001d029581_P001	Maize	cytosol	56.04	54.36
TraesCS7B01G094800.1	Wheat	mitochondrion	55.01	54.31
HORVU7Hr1G038590.1	Barley	mitochondrion	54.24	53.96
Os03t0422600-00	Rice	mitochondrion	36.25	51.65
OQU92343	Sorghum	golgi	46.53	46.41
HORVU3Hr1G055170.1	Barley	mitochondrion	8.23	38.1
CDY67905	Canola	cytosol	33.93	34.11
CDY52126	Canola	cytosol	33.42	33.77

Protein Annotations

EnsemblPlants:CDY03474	EnsemblPlantsGene:GSBRNA2T00116136001	Gene3D:3.40.50.720	GO:A0A078ES20	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR32487	PANTHER:PTHR32487:SF0
PFAM:PF01370	ProteinID:CDY03474	ProteinID:CDY03474.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI0004EEAD4F
MapMan:35.1	:	:	:	:	:

Description

BnaC01g16080D

Coordinates

chrLK031943:-:636244..637580

Molecular Weight (calculated)

44104.2 Da

IEP (calculated)

5.086

GRAVY (calculated)

-0.361

Length

389 amino acids

Sequence
(BLAST)

001: MSWWWAGAIG AAKKKFDDDE PTQTYESVAL IIGVTGIVGN SLAEILPLSD TPGGPWKVYG VARRPRPSWN ADHPIDYIQC DVSDPDDVRS KLSPLTDVTH
101: VFYVTWTNRS SEGENCEANG SMLRNVLRAV VPNAPNLRHV CLQTGTKHYI GPFKDLETTR YHDPPFTEDM PRLGVENFYY ALEDVLFEEI KKKESVTWSV
201: HRPNTIFGFS PYSLMNIVGT LCVYAAICKH EGTKLSFPGS KKAWEGFSTA SDADLIAEQQ IWAAVDPYAK NEAFNCNNDD VFKWKHLWKI LAEQFGIEEY
301: GFEEGKNVGL VEMMKGKESV WEEMVKENQL QEKKLGEVGV WWFVDVILGV EGMIDSMNKS KEHGFLGFRN SNNSFISWID KYKAFKIVP

Best Arabidopsis Sequence Match ( AT4G24220.1 )
(BLAST)

001: MSWWWAGAIG AAKKKLDEDE PSQSFESVAL IIGVTGIVGN SLAEILPLSD TPGGPWKVYG VARRPRPTWN ADHPIDYIQC DVSDAEDTRS KLSPLTDVTH
101: VFYVTWTNRE SESENCEANG SMLRNVLQAI IPYAPNLRHV CLQTGTKHYL GPFTNVDGPR HDPPFTEDMP RLQIQNFYYT QEDILFEEIK KIETVTWSIH
201: RPNMIFGFSP YSLMNIVGTL CVYAAICKHE GSPLLFPGSK KAWEGFMTAS DADLIAEQQI WAAVDPYAKN EAFNCNNADI FKWKHLWKIL AEQFGIEEYG
301: FEEGKNLGLV EMMKGKERVW EEMVKENQLQ EKKLEEVGVW WFADVILGVE GMIDSMNKSK EYGFLGFRNS NNSFISWIDK YKAFKIVP

Arabidopsis Description

VEP13-oxo-Delta(4,5)-steroid 5-beta-reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9STX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.