Factsheet for TraesCS3A01G508600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G506500.1	Wheat	extracellular	68.45	99.26
TraesCS3A01G506400.1	Wheat	extracellular	68.45	99.26
TraesCS3D01G514300.1	Wheat	plastid	96.95	96.95
TraesCS3B01G574600.1	Wheat	mitochondrion	93.89	93.89
HORVU0Hr1G007340.1	Barley	plastid	92.37	90.98
TraesCS3A01G506600.1	Wheat	mitochondrion	88.55	88.55
Os11t0351555-01	Rice	cytosol	82.95	82.32
Os03t0436400-01	Rice	plasma membrane	82.95	82.32
TraesCS3A01G507400.1	Wheat	golgi	81.68	80.86
Zm00001d029582_P001	Maize	extracellular	79.13	78.54
EER92090	Sorghum	cytosol	78.63	78.03
GSMUA_Achr4P16440_001	Banana	cytosol	57.25	65.03
GSMUA_Achr3P30170_001	Banana	cytosol	55.22	62.54
GSMUA_Achr6P24680_001	Banana	golgi	46.82	61.13
KRH52063	Soybean	nucleus	59.54	60.31
CDY34267	Canola	cytosol	57.51	57.95
Bra013777.1-P	Field mustard	cytosol	57.51	57.95
CDY03474	Canola	cytosol	57.25	57.84
VIT_18s0001g09420.t01	Wine grape	cytosol	56.74	57.18
AT4G24220.1	Thale cress	cytosol	56.23	56.96
CDY08911	Canola	cytosol	55.98	56.41
CDY10994	Canola	cytosol	54.2	56.2
PGSC0003DMT400013949	Potato	cytosol	55.47	56.19
CDY24831	Canola	cytosol	55.73	56.15
Bra010499.1-P	Field mustard	cytosol	55.73	56.15
CDX92623	Canola	cytosol	54.2	56.05
Bra019241.1-P	Field mustard	cytosol	53.94	55.94
Solyc10g049620.1.1	Tomato	plastid	55.22	55.93
VIT_03s0091g00450.t01	Wine grape	cytosol	54.96	55.53
Solyc10g049600.1.1	Tomato	cytosol	53.94	55.06
PGSC0003DMT400025509	Potato	cytosol	53.69	54.38
PGSC0003DMT400039098	Potato	cytosol	52.16	52.84
KRH15431	Soybean	cytosol	8.91	51.47
CDY36344	Canola	extracellular	10.18	46.51
PGSC0003DMT400071398	Potato	cytosol	45.04	44.7
Solyc01g091670.2.1	Tomato	cytosol	42.75	42.86

Protein Annotations

EnsemblPlants:TraesCS3A01G508600.1	EnsemblPlantsGene:TraesCS3A01G508600	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR32487	PANTHER:PTHR32487:SF10
SEG:seg	SUPFAM:SSF51735	TIGR:cd08948	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr3A:+:729690661..729691842

Molecular Weight (calculated)

43890.1 Da

IEP (calculated)

4.871

GRAVY (calculated)

-0.162

Length

393 amino acids

Sequence
(BLAST)

001: MSWWWAGAVG AVKKSQEERT ELSFQSVALV IGSTGIVGTS LIDILPRDDT PGGPWKVYAV SRRPLPPWSP QPSPAVTHLL LDLADPVAVA EALKPLTDIT
101: HVFYAAWSSH PTEAQNREAN SAMLRNVLSV LVPGCPALAH VCLQTGRKHY IGPYEAIGKI PVPDPPYTED MPRLDYPNFY YDQEDVLFEE VSRRDGAVSW
201: SVHRPSVVFG FSPRSAMNVV ASLSVYAAIC RKEGAMLRWP GSRVAWEGFS DASDADLVAE QEIWAAIDPL ARNEAFNCSN GDLYKWKQLW PMVADRFGVE
301: WAGYEGEDSR FMLADAMAGK EAVWAEILQE NELVTTELQE IANWWFLDAV FNVKCEHLDS MNKSKEHGFL GFRNTAKSFN AWIDKMKVLK IVP

Best Arabidopsis Sequence Match ( AT4G24220.2 )
(BLAST)

001: MSWWWAGAIG AAKKLDEDEP SQSFESVALI IGVTGIVGNS LAEILPLSDT PGGPWKVYGV ARRPRPTWNA DHPIDYIQCD VSDAEDTRSK LSPLTDVTHV
101: FYVTWTNRES ESENCEANGS MLRNVLQAII PYAPNLRHVC LQTGTKHYLG PFTNVDGPRH DPPFTEDMPR LQIQNFYYTQ EDILFEEIKK IETVTWSIHR
201: PNMIFGFSPY SLMNIVGTLC VYAAICKHEG SPLLFPGSKK AWEGFMTASD ADLIAEQQIW AAVDPYAKNE AFNCNNADIF KWKHLWKILA EQFGIEEYGF
301: EEGKNLGLVE MMKGKERVWE EMVKENQLQE KKLEEVGVWW FADVILGVEG MIDSMNKSKE YGFLGFRNSN NSFISWIDKY KAFKIVP

Arabidopsis Description

VEP13-oxo-Delta(4,5)-steroid 5-beta-reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9STX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.