Factsheet for TraesCS3A01G506600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G514400.1	Wheat	plastid	95.42	94.46
TraesCS3A01G508600.1	Wheat	cytosol	88.55	88.55
TraesCS3A01G506500.1	Wheat	extracellular	60.81	88.19
TraesCS3A01G506400.1	Wheat	extracellular	60.81	88.19
TraesCS3A01G507400.1	Wheat	golgi	84.22	83.38
Os11t0351555-01	Rice	cytosol	83.72	83.08
Os03t0436400-01	Rice	plasma membrane	83.72	83.08
Zm00001d029582_P001	Maize	extracellular	82.44	81.82
EER92090	Sorghum	cytosol	82.19	81.57
GSMUA_Achr4P16440_001	Banana	cytosol	58.52	66.47
GSMUA_Achr3P30170_001	Banana	cytosol	56.49	63.98
GSMUA_Achr6P24680_001	Banana	golgi	46.82	61.13
CDY34267	Canola	cytosol	58.78	59.23
Bra013777.1-P	Field mustard	cytosol	58.78	59.23
CDY03474	Canola	cytosol	58.52	59.13
KRH52063	Soybean	nucleus	58.27	59.02
PGSC0003DMT400013949	Potato	cytosol	57.25	57.99
AT4G24220.1	Thale cress	cytosol	57.0	57.73
Solyc10g049620.1.1	Tomato	plastid	57.0	57.73
CDY08911	Canola	cytosol	56.74	57.18
Bra010499.1-P	Field mustard	cytosol	56.49	56.92
CDY24831	Canola	cytosol	56.49	56.92
Solyc10g049600.1.1	Tomato	cytosol	55.73	56.88
VIT_03s0091g00450.t01	Wine grape	cytosol	56.23	56.81
VIT_18s0001g09420.t01	Wine grape	cytosol	55.98	56.41
CDY10994	Canola	cytosol	53.44	55.41
CDX92623	Canola	cytosol	53.44	55.26
PGSC0003DMT400025509	Potato	cytosol	54.45	55.15
Bra019241.1-P	Field mustard	cytosol	53.18	55.15
PGSC0003DMT400039098	Potato	cytosol	53.69	54.38
KRH15431	Soybean	cytosol	8.65	50.0
CDY36344	Canola	extracellular	10.69	48.84
PGSC0003DMT400071398	Potato	cytosol	45.55	45.2
Solyc01g091670.2.1	Tomato	cytosol	43.26	43.37

Protein Annotations

EnsemblPlants:TraesCS3A01G506600.1	EnsemblPlantsGene:TraesCS3A01G506600	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR32487	PANTHER:PTHR32487:SF10
SEG:seg	SUPFAM:SSF51735	TIGR:cd08948	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr3A:+:728056588..728057769

Molecular Weight (calculated)

43438.4 Da

IEP (calculated)

5.018

GRAVY (calculated)

-0.064

Length

393 amino acids

Sequence
(BLAST)

001: MSWWWAGAVG AVKKSQDERA ASSFQSVALV VGSTGIVGTS LVDILPRDDT PGGPWKVYAV SRRPLPPWCP PPSPAITHLY LDLADPAAVA EALTPLTDIS
101: HVFYAAWSSH PTEAQNREAN SAMLRNVLSV VVPGCPALAH VCLQTGRKHY VGPFEAVGKL GVPDPPYTED MPRLDYPNFY YDLEDTLFDE VSRRDGAVSW
201: SVHRPSVVFG FSARSAMNIV ASLCVYAAIC RKEGAVLRWP GCRVAWEGFS DASDADLIAE HEIWAAVDPF AKNEAFNCSN GDVFKWKQLW PMLADRFGVE
301: WAGYEGEGSR FVLADAMAGK EAVWAEILRE NELVTTGLHE IANWWFVDAM FNVEIEHLDS MNKSKEHGFL GFRNTASSFN AWIDKMKVLK IVP

Best Arabidopsis Sequence Match ( AT5G58750.2 )
(BLAST)

001: MRRNEVDENV ALIFGVTGLV GREIVKTLLM SKPGWRIYGV ARNPEINSMT KMYNFISCDL LNASETKQRL SPLQDIVSHV FWVTWSGEFP LDTDECCVQN
101: KTMLMNALDA ILPNAKRLKH FSLQTGMKHY VSLVEETMAR GEGSSLYYYS EECPRKSSGK NFYYVLEDLL KEKITRSSVV WSVQRPGLLM GSSSRTLYNF
201: MGSLCVYGAM CKYLNLPFVF GGTRECWEES YIDGSDSNLV AEQHIFAATS GKVREKGEAF NAINGVGFTW KEIWPEIGKK LGVQVNETTM FDEGFWFGRE
301: MVERKHVWDE IVVKEKLVRT EIEDLANWYF LDALFRCPFK LLGKREKVDR FGFKRKYRTL DSVLYWIDVM RDEKLIPL

Arabidopsis Description

At5g58750 [Source:UniProtKB/TrEMBL;Acc:Q9LUY6]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.