Factsheet for PGSC0003DMT400071398

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g091670.2.1	Tomato	cytosol	91.92	92.86
PGSC0003DMT400013949	Potato	cytosol	57.83	59.02
KRH52063	Soybean	nucleus	57.58	58.76
VIT_18s0001g09420.t01	Wine grape	cytosol	57.58	58.46
PGSC0003DMT400039098	Potato	cytosol	57.07	58.25
CDY36344	Canola	extracellular	12.63	58.14
Bra019241.1-P	Field mustard	cytosol	54.55	56.99
CDY03474	Canola	cytosol	55.81	56.81
Bra010499.1-P	Field mustard	cytosol	55.81	56.67
CDY24831	Canola	cytosol	55.81	56.67
CDY10994	Canola	cytosol	54.04	56.46
Bra013777.1-P	Field mustard	cytosol	55.56	56.41
CDY34267	Canola	cytosol	55.56	56.41
CDY08911	Canola	cytosol	55.3	56.15
CDX92623	Canola	cytosol	53.79	56.05
AT4G24220.1	Thale cress	cytosol	54.8	55.93
PGSC0003DMT400025509	Potato	cytosol	54.55	55.67
GSMUA_Achr3P30170_001	Banana	cytosol	44.7	51.01
GSMUA_Achr4P16440_001	Banana	cytosol	44.19	50.58
EER92090	Sorghum	cytosol	47.98	47.98
Os11t0351555-01	Rice	cytosol	47.73	47.73
Os03t0436400-01	Rice	plasma membrane	47.73	47.73
GSMUA_Achr6P24680_001	Banana	golgi	36.11	47.51
Zm00001d029582_P001	Maize	extracellular	47.47	47.47
KRH15431	Soybean	cytosol	8.08	47.06
TraesCS3A01G506400.1	Wheat	extracellular	32.07	46.86
TraesCS3A01G506500.1	Wheat	extracellular	32.07	46.86
TraesCS3A01G507400.1	Wheat	golgi	46.97	46.85
TraesCS3B01G575500.1	Wheat	golgi	46.72	46.6
HORVU3Hr1G111650.1	Barley	cytosol, mitochondrion	47.47	46.53
TraesCS3D01G514400.1	Wheat	plastid	46.21	46.1
Os07t0601600-00	Rice	plasma membrane	47.47	45.85
TraesCS3D01G514300.1	Wheat	plastid	45.45	45.8
TraesCS3A01G506600.1	Wheat	mitochondrion	45.2	45.55
EES08251	Sorghum	mitochondrion	47.47	45.52
TraesCS3A01G508600.1	Wheat	cytosol	44.7	45.04
Zm00001d029580_P001	Maize	cytosol	45.45	44.89
Zm00001d029581_P001	Maize	cytosol	45.45	44.89
Os03t0422600-00	Rice	mitochondrion	30.56	44.32
TraesCS3B01G574600.1	Wheat	mitochondrion	43.94	44.27
HORVU0Hr1G007340.1	Barley	plastid	44.44	44.11
TraesCS7D01G191000.1	Wheat	mitochondrion	42.42	42.75
HORVU7Hr1G038590.1	Barley	mitochondrion	41.67	42.2
TraesCS7B01G094800.1	Wheat	mitochondrion	41.67	41.88
OQU92343	Sorghum	golgi	36.36	36.92
HORVU3Hr1G055170.1	Barley	mitochondrion	7.58	35.71

Protein Annotations

EnsemblPlants:PGSC0003DMT400071398	EnsemblPlantsGene:PGSC0003DMG400027778	EntrezGene:102589154	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR32487
PANTHER:PTHR32487:SF0	PGSC:PGSC0003DMG400027778	RefSeq:XP_006339461.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI000295B4A1
UniProt:M1CNQ1	MapMan:35.1	:	:	:	:

Description

Progesterone 5beta reductase-A [Source:PGSC_GENE;Acc:PGSC0003DMG400027778]

Coordinates

chr1:+:71132925..71134313

Molecular Weight (calculated)

44518.6 Da

IEP (calculated)

8.163

GRAVY (calculated)

-0.104

Length

396 amino acids

Sequence
(BLAST)

001: MNWWLSRSIN NALQKNVEYR GTHEISYQNV GLIIGVTGVV GNSLAGTLSS TDTPGGPWKV YGVSRRGTPV CSIAKVTYIQ CDVSKATDVQ AKLSTLKDVT
101: HIFWVTLAFD LSTAKSCEIN GAMFRNVLTC VIPNAPNLRH ICLQTGGMHY MGIHKSIDGE LHVTSHDPPF NEDMKRLENI HNFYYTLEDV LFDEVSRKPS
201: LTWSVHRPDL IFGFSPYSSL NIIGTLCVYA TICKFIRIPM KFPGTEAVWD SFSNASDANL VAEHQIWAAM CPQGKNRAFN ITNGDVFKWK HLWKVLAEEI
301: GVEYVGFDAT EKIISLSEMM KDKGPVWDKI VRDNKLISTK LEEVGLWDFA DMLLGGGTCR LSSINRSKEN GFIGFRNSIN SFIFWIHKAK HNRLIP

Best Arabidopsis Sequence Match ( AT4G24220.1 )
(BLAST)

001: MSWWWAGAIG AAKKKLDEDE PSQSFESVAL IIGVTGIVGN SLAEILPLSD TPGGPWKVYG VARRPRPTWN ADHPIDYIQC DVSDAEDTRS KLSPLTDVTH
101: VFYVTWTNRE SESENCEANG SMLRNVLQAI IPYAPNLRHV CLQTGTKHYL GPFTNVDGPR HDPPFTEDMP RLQIQNFYYT QEDILFEEIK KIETVTWSIH
201: RPNMIFGFSP YSLMNIVGTL CVYAAICKHE GSPLLFPGSK KAWEGFMTAS DADLIAEQQI WAAVDPYAKN EAFNCNNADI FKWKHLWKIL AEQFGIEEYG
301: FEEGKNLGLV EMMKGKERVW EEMVKENQLQ EKKLEEVGVW WFADVILGVE GMIDSMNKSK EYGFLGFRNS NNSFISWIDK YKAFKIVP

Arabidopsis Description

VEP13-oxo-Delta(4,5)-steroid 5-beta-reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9STX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.