Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019241.1-P | Field mustard | cytosol | 98.94 | 98.94 |
| CDX92623 | Canola | cytosol | 93.14 | 92.89 |
| AT4G24220.1 | Thale cress | cytosol | 82.85 | 80.93 |
| CDY03474 | Canola | cytosol | 82.59 | 80.46 |
| CDY24831 | Canola | cytosol | 82.59 | 80.26 |
| CDY08911 | Canola | cytosol | 82.32 | 80.0 |
| CDY34267 | Canola | cytosol | 81.79 | 79.49 |
| KRH15431 | Soybean | cytosol | 12.4 | 69.12 |
| KRH52063 | Soybean | nucleus | 69.39 | 67.78 |
| Solyc10g049620.1.1 | Tomato | plastid | 68.6 | 67.01 |
| PGSC0003DMT400013949 | Potato | cytosol | 68.34 | 66.75 |
| VIT_18s0001g09420.t01 | Wine grape | cytosol | 67.81 | 65.9 |
| CDY36344 | Canola | extracellular | 14.51 | 63.95 |
| PGSC0003DMT400025509 | Potato | cytosol | 64.91 | 63.4 |
| Solyc10g049600.1.1 | Tomato | cytosol | 63.85 | 62.86 |
| PGSC0003DMT400039098 | Potato | cytosol | 63.59 | 62.11 |
| GSMUA_Achr3P30170_001 | Banana | cytosol | 56.2 | 61.38 |
| GSMUA_Achr4P16440_001 | Banana | cytosol | 55.15 | 60.4 |
| TraesCS3A01G506500.1 | Wheat | extracellular | 40.9 | 57.2 |
| TraesCS3A01G506400.1 | Wheat | extracellular | 40.9 | 57.2 |
| GSMUA_Achr6P24680_001 | Banana | golgi | 44.85 | 56.48 |
| TraesCS3A01G507400.1 | Wheat | golgi | 58.84 | 56.17 |
| TraesCS3B01G575500.1 | Wheat | golgi | 58.58 | 55.92 |
| Os03t0436400-01 | Rice | plasma membrane | 58.31 | 55.81 |
| Os11t0351555-01 | Rice | cytosol | 58.31 | 55.81 |
| TraesCS3D01G514300.1 | Wheat | plastid | 57.52 | 55.47 |
| Zm00001d029582_P001 | Maize | extracellular | 56.73 | 54.29 |
| EER92090 | Sorghum | cytosol | 56.73 | 54.29 |
| TraesCS3B01G574600.1 | Wheat | mitochondrion | 56.2 | 54.2 |
| TraesCS3A01G508600.1 | Wheat | cytosol | 56.2 | 54.2 |
| PGSC0003DMT400071398 | Potato | cytosol | 56.46 | 54.04 |
| HORVU3Hr1G111650.1 | Barley | cytosol, mitochondrion | 57.26 | 53.71 |
| TraesCS3A01G506600.1 | Wheat | mitochondrion | 55.41 | 53.44 |
| TraesCS3D01G514400.1 | Wheat | plastid | 55.67 | 53.15 |
| Solyc01g091670.2.1 | Tomato | cytosol | 54.62 | 52.81 |
| EES08251 | Sorghum | mitochondrion | 57.52 | 52.78 |
| HORVU0Hr1G007340.1 | Barley | plastid | 55.15 | 52.38 |
| Os07t0601600-00 | Rice | plasma membrane | 55.94 | 51.71 |
| Zm00001d029580_P001 | Maize | cytosol | 54.35 | 51.37 |
| Zm00001d029581_P001 | Maize | cytosol | 53.3 | 50.37 |
| TraesCS7D01G191000.1 | Wheat | mitochondrion | 51.19 | 49.36 |
| TraesCS7B01G094800.1 | Wheat | mitochondrion | 50.92 | 48.98 |
| HORVU7Hr1G038590.1 | Barley | mitochondrion | 49.6 | 48.08 |
| Os03t0422600-00 | Rice | mitochondrion | 33.25 | 46.15 |
| HORVU3Hr1G055170.1 | Barley | mitochondrion | 9.76 | 44.05 |
| OQU92343 | Sorghum | golgi | 43.01 | 41.79 |
| CDY52126 | Canola | cytosol | 34.04 | 33.51 |
| CDY67905 | Canola | cytosol | 34.04 | 33.33 |
Protein Annotations
| EnsemblPlants:CDY10994 | EnsemblPlantsGene:GSBRNA2T00048939001 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR32487 | PANTHER:PTHR32487:SF0 |
| ProteinID:CDY10994 | ProteinID:CDY10994.1 | SEG:seg | SUPFAM:SSF51735 | UniParc:UPI0004EEAE74 | UniProt:A0A078FDH0 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA03g46530DBnaA03g46530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FDH0]
Coordinates
chrLK032008:+:554161..555369
Molecular Weight (calculated)
42602.7 Da
IEP (calculated)
7.457
GRAVY (calculated)
-0.330
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MSWWWAGAIG AAKKKIDDNY EPTQSYQSVA LIIGVTGIIG NSLAEILPLS DTPGGPWKVY GVAPSPRPTW KADHPVGYIQ CDVSNAEETR SKLSPLTDVT
101: DVFYITCTNL ESEANGSTLR NVLRAVVPGV KNLRHVCLQT GTNHYKSLDP PFTEDMPRLK IKNNFYYTLE DVLFEEIKKK KESSTVTWSV HRPNTIFGFS
201: PYSLTNVVGT LCVYAAICKQ EGSPLLFPGS KAAWEGYTAA SDADLVAEQQ IWAAVDPYAK NEAFNCNNGD VFKWKHLWKV LAERFGIEKY GFEEGKNVGL
301: VKMMKGKERV WEEVVKKNQL QEKKLEDVGV WWFADDVLGV EGMIDSMNKS KEHGFLGFRN SKNSFISWID KYKAFKIVP
101: DVFYITCTNL ESEANGSTLR NVLRAVVPGV KNLRHVCLQT GTNHYKSLDP PFTEDMPRLK IKNNFYYTLE DVLFEEIKKK KESSTVTWSV HRPNTIFGFS
201: PYSLTNVVGT LCVYAAICKQ EGSPLLFPGS KAAWEGYTAA SDADLVAEQQ IWAAVDPYAK NEAFNCNNGD VFKWKHLWKV LAERFGIEKY GFEEGKNVGL
301: VKMMKGKERV WEEVVKKNQL QEKKLEDVGV WWFADDVLGV EGMIDSMNKS KEHGFLGFRN SKNSFISWID KYKAFKIVP
001: MSWWWAGAIG AAKKKLDEDE PSQSFESVAL IIGVTGIVGN SLAEILPLSD TPGGPWKVYG VARRPRPTWN ADHPIDYIQC DVSDAEDTRS KLSPLTDVTH
101: VFYVTWTNRE SESENCEANG SMLRNVLQAI IPYAPNLRHV CLQTGTKHYL GPFTNVDGPR HDPPFTEDMP RLQIQNFYYT QEDILFEEIK KIETVTWSIH
201: RPNMIFGFSP YSLMNIVGTL CVYAAICKHE GSPLLFPGSK KAWEGFMTAS DADLIAEQQI WAAVDPYAKN EAFNCNNADI FKWKHLWKIL AEQFGIEEYG
301: FEEGKNLGLV EMMKGKERVW EEMVKENQLQ EKKLEEVGVW WFADVILGVE GMIDSMNKSK EYGFLGFRNS NNSFISWIDK YKAFKIVP
101: VFYVTWTNRE SESENCEANG SMLRNVLQAI IPYAPNLRHV CLQTGTKHYL GPFTNVDGPR HDPPFTEDMP RLQIQNFYYT QEDILFEEIK KIETVTWSIH
201: RPNMIFGFSP YSLMNIVGTL CVYAAICKHE GSPLLFPGSK KAWEGFMTAS DADLIAEQQI WAAVDPYAKN EAFNCNNADI FKWKHLWKIL AEQFGIEEYG
301: FEEGKNLGLV EMMKGKERVW EEMVKENQLQ EKKLEEVGVW WFADVILGVE GMIDSMNKSK EYGFLGFRNS NNSFISWIDK YKAFKIVP
Arabidopsis Description
VEP13-oxo-Delta(4,5)-steroid 5-beta-reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9STX2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.