Factsheet for TraesCS3B01G574600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G514300.1	Wheat	plastid	96.18	96.18
TraesCS3A01G506500.1	Wheat	extracellular	65.39	94.83
TraesCS3A01G506400.1	Wheat	extracellular	65.39	94.83
TraesCS3A01G508600.1	Wheat	cytosol	93.89	93.89
HORVU0Hr1G007340.1	Barley	plastid	93.89	92.48
Os11t0351555-01	Rice	cytosol	84.48	83.84
Os03t0436400-01	Rice	plasma membrane	84.48	83.84
TraesCS3B01G575500.1	Wheat	golgi	82.95	82.12
Zm00001d029582_P001	Maize	extracellular	80.15	79.55
EER92090	Sorghum	cytosol	79.9	79.29
TraesCS7B01G094800.1	Wheat	mitochondrion	67.43	67.26
GSMUA_Achr4P16440_001	Banana	cytosol	57.76	65.61
GSMUA_Achr3P30170_001	Banana	cytosol	55.98	63.4
GSMUA_Achr6P24680_001	Banana	golgi	47.07	61.46
KRH52063	Soybean	nucleus	58.78	59.54
Bra013777.1-P	Field mustard	cytosol	57.76	58.21
CDY34267	Canola	cytosol	57.76	58.21
CDY03474	Canola	cytosol	57.51	58.1
AT4G24220.1	Thale cress	cytosol	56.23	56.96
VIT_03s0091g00450.t01	Wine grape	cytosol	55.98	56.56
CDY08911	Canola	cytosol	55.98	56.41
CDY10994	Canola	cytosol	54.2	56.2
VIT_18s0001g09420.t01	Wine grape	cytosol	55.73	56.15
CDY24831	Canola	cytosol	55.73	56.15
Bra010499.1-P	Field mustard	cytosol	55.73	56.15
CDX92623	Canola	cytosol	54.2	56.05
Bra019241.1-P	Field mustard	cytosol	53.94	55.94
PGSC0003DMT400013949	Potato	cytosol	54.96	55.67
Solyc10g049600.1.1	Tomato	cytosol	54.45	55.58
Solyc10g049620.1.1	Tomato	plastid	54.71	55.41
PGSC0003DMT400025509	Potato	cytosol	53.69	54.38
KRH15431	Soybean	cytosol	9.16	52.94
PGSC0003DMT400039098	Potato	cytosol	51.91	52.58
CDY36344	Canola	extracellular	10.43	47.67
PGSC0003DMT400071398	Potato	cytosol	44.27	43.94
Solyc01g091670.2.1	Tomato	cytosol	42.24	42.35

Protein Annotations

EnsemblPlants:TraesCS3B01G574600.1	EnsemblPlantsGene:TraesCS3B01G574600	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR32487	PANTHER:PTHR32487:SF10	PFAM:PF01370
SEG:seg	SUPFAM:SSF51735	TIGR:cd08948	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr3B:-:805003470..805004651

Molecular Weight (calculated)

43718.7 Da

IEP (calculated)

5.129

GRAVY (calculated)

-0.188

Length

393 amino acids

Sequence
(BLAST)

001: MSWWWAGAVG AVKKSQDERA ASSFQSVALV VGSTGIVGTS LVDILPRHDT PGGPWKVYAV SRRPLPPWSP PPSPAVTHLH LDLADPVAVA EALTPLTDIT
101: HVFYAAWSSH PTEAQNREAN SAMLRNMLSV VVPGCPALAH VCLQTGRKHY IGPYEAIGKI PIPDPPYTED MPRLDYPNFY YDQEDVLFEE VSHRDGAVSW
201: SVHRPSVVFG FSPRSAMNVV ASLCVYAAIC RKEGATLRWP GTRVAWEGFS DASDADLLAE QEIWAAVDPL AKNEPFNCSN GDLYKWKQLW PMVADRFGVE
301: WTGYEGEDSR FMLADAMAGK EAVWAEILQE NELVTTELQE IANWWFLDAV FNVKSEHLDS MNKSKEHGFL GFRNTAKSFN AWIDKMKALK IVP

Best Arabidopsis Sequence Match ( AT4G24220.2 )
(BLAST)

001: MSWWWAGAIG AAKKLDEDEP SQSFESVALI IGVTGIVGNS LAEILPLSDT PGGPWKVYGV ARRPRPTWNA DHPIDYIQCD VSDAEDTRSK LSPLTDVTHV
101: FYVTWTNRES ESENCEANGS MLRNVLQAII PYAPNLRHVC LQTGTKHYLG PFTNVDGPRH DPPFTEDMPR LQIQNFYYTQ EDILFEEIKK IETVTWSIHR
201: PNMIFGFSPY SLMNIVGTLC VYAAICKHEG SPLLFPGSKK AWEGFMTASD ADLIAEQQIW AAVDPYAKNE AFNCNNADIF KWKHLWKILA EQFGIEEYGF
301: EEGKNLGLVE MMKGKERVWE EMVKENQLQE KKLEEVGVWW FADVILGVEG MIDSMNKSKE YGFLGFRNSN NSFISWIDKY KAFKIVP

Arabidopsis Description

VEP13-oxo-Delta(4,5)-steroid 5-beta-reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9STX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.