Factsheet for Bra010499.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24831	Canola	cytosol	100.0	100.0
Bra013777.1-P	Field mustard	cytosol	88.21	88.21
AT4G24220.1	Thale cress	cytosol	87.44	87.89
Bra019241.1-P	Field mustard	cytosol	80.77	83.11
KRH52063	Soybean	nucleus	73.08	73.45
PGSC0003DMT400013949	Potato	cytosol	72.82	73.2
Solyc10g049620.1.1	Tomato	plastid	72.31	72.68
VIT_18s0001g09420.t01	Wine grape	cytosol	69.74	69.74
PGSC0003DMT400025509	Potato	cytosol	67.95	68.3
Solyc10g049600.1.1	Tomato	cytosol	66.15	67.01
PGSC0003DMT400039098	Potato	cytosol	65.38	65.72
GSMUA_Achr3P30170_001	Banana	cytosol	58.21	65.42
GSMUA_Achr4P16440_001	Banana	cytosol	57.44	64.74
KRH15431	Soybean	cytosol	10.51	60.29
TraesCS3A01G507400.1	Wheat	golgi	59.74	58.69
Zm00001d029582_P001	Maize	extracellular	59.49	58.59
Os11t0351555-01	Rice	cytosol	59.49	58.59
Os03t0436400-01	Rice	plasma membrane	59.49	58.59
EER92090	Sorghum	cytosol	59.49	58.59
TraesCS3A01G506400.1	Wheat	extracellular	40.51	58.3
TraesCS3A01G506500.1	Wheat	extracellular	40.51	58.3
GSMUA_Achr6P24680_001	Banana	golgi	44.87	58.14
TraesCS3B01G575500.1	Wheat	golgi	58.97	57.93
TraesCS3D01G514300.1	Wheat	plastid	57.44	57.0
HORVU3Hr1G111650.1	Barley	cytosol, mitochondrion	58.72	56.68
TraesCS3A01G506600.1	Wheat	mitochondrion	56.92	56.49
TraesCS3D01G514400.1	Wheat	plastid	57.18	56.17
PGSC0003DMT400071398	Potato	cytosol	56.67	55.81
TraesCS3B01G574600.1	Wheat	mitochondrion	56.15	55.73
TraesCS3A01G508600.1	Wheat	cytosol	56.15	55.73
EES08251	Sorghum	mitochondrion	58.46	55.21
Solyc01g091670.2.1	Tomato	cytosol	55.38	55.1
Os07t0601600-00	Rice	plasma membrane	56.92	54.15
HORVU0Hr1G007340.1	Barley	plastid	55.13	53.88
Zm00001d029580_P001	Maize	cytosol	55.13	53.62
TraesCS7D01G191000.1	Wheat	mitochondrion	52.82	52.42
Zm00001d029581_P001	Maize	cytosol	53.85	52.37
HORVU7Hr1G038590.1	Barley	mitochondrion	52.31	52.17
TraesCS7B01G094800.1	Wheat	mitochondrion	52.56	52.03
Os03t0422600-00	Rice	mitochondrion	35.38	50.55
OQU92343	Sorghum	golgi	45.38	45.38
HORVU3Hr1G055170.1	Barley	mitochondrion	8.46	39.29
Bra002620.1-P	Field mustard	cytosol	35.13	35.49

Protein Annotations

EMBL:KC663434	EnsemblPlants:Bra010499.1	EnsemblPlants:Bra010499.1-P	EnsemblPlantsGene:Bra010499	Gene3D:3.40.50.720	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0047568	GO:GO:0055114
InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR32487	PANTHER:PTHR32487:SF0	ProteinID:AGL96526	ProteinID:AGL96526.1	SEG:seg
SUPFAM:SSF51735	UniParc:UPI0002545C3B	UniProt:M4D1Z9	MapMan:35.1	:	:

Description

AT4G24220 (E=1e-201) VEP1, AWI31 | VEP1 (VEIN PATTERNING 1); binding / catalytic

Coordinates

chrA08:-:14839364..14840601

Molecular Weight (calculated)

44183.3 Da

IEP (calculated)

4.934

GRAVY (calculated)

-0.341

Length

390 amino acids

Sequence
(BLAST)

001: MSWWWAGAIG AAKKKFDEDE PTQTYESVAL IIGVTGIVGN SLAEILPLSD TPGGPWKVYG VARRPRPTWN ADHPIDYIQC DVSDEEDARS KLSPLKDVTH
101: VFYVTWTNRS SEVDNCKVNG SMLRNVLRAV VPNAPNLRHV CLQTGTKHYL GPFDSVGKDV DRHEAPFTEE MPRLKIENFY YTLEDVLSEE IKTKESVTWS
201: VHRPNTIFGF SPYSLMNIVG TLCVYAAICK HEGSKLVFPG SKEAWEGFTT ASDADLVAEQ QIWAAVDPYA KNEAFNCSNA DVFKWKHLWK ILAEQFGIEE
301: YGFEEGKNVG LVEMMKGKES VWEEMVKENQ LQEKKLDEVG VWWFADVVLG VDGMIDSMNK SKEYGFLGFR NSNNSFISWI DKYKAFKIVP

Best Arabidopsis Sequence Match ( AT4G24220.1 )
(BLAST)

001: MSWWWAGAIG AAKKKLDEDE PSQSFESVAL IIGVTGIVGN SLAEILPLSD TPGGPWKVYG VARRPRPTWN ADHPIDYIQC DVSDAEDTRS KLSPLTDVTH
101: VFYVTWTNRE SESENCEANG SMLRNVLQAI IPYAPNLRHV CLQTGTKHYL GPFTNVDGPR HDPPFTEDMP RLQIQNFYYT QEDILFEEIK KIETVTWSIH
201: RPNMIFGFSP YSLMNIVGTL CVYAAICKHE GSPLLFPGSK KAWEGFMTAS DADLIAEQQI WAAVDPYAKN EAFNCNNADI FKWKHLWKIL AEQFGIEEYG
301: FEEGKNLGLV EMMKGKERVW EEMVKENQLQ EKKLEEVGVW WFADVILGVE GMIDSMNKSK EYGFLGFRNS NNSFISWIDK YKAFKIVP

Arabidopsis Description

VEP13-oxo-Delta(4,5)-steroid 5-beta-reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9STX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.