Factsheet for HORVU3Hr1G111650.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 4
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G507400.1	Wheat	golgi	93.32	94.96
TraesCS3B01G575500.1	Wheat	golgi	92.08	93.7
Os11t0351555-01	Rice	cytosol	78.96	80.56
Os03t0436400-01	Rice	plasma membrane	78.96	80.56
HORVU0Hr1G007340.1	Barley	plastid	79.21	80.2
EER92090	Sorghum	cytosol	78.47	80.05
Zm00001d029582_P001	Maize	extracellular	76.73	78.28
HORVU7Hr1G038590.1	Barley	mitochondrion	64.6	66.75
GSMUA_Achr4P16440_001	Banana	cytosol	55.94	65.32
GSMUA_Achr3P30170_001	Banana	cytosol	54.7	63.69
GSMUA_Achr6P24680_001	Banana	golgi	45.79	61.46
PGSC0003DMT400013949	Potato	cytosol	57.18	59.54
CDY03474	Canola	cytosol	57.18	59.38
Solyc10g049620.1.1	Tomato	plastid	56.93	59.28
CDY34267	Canola	cytosol	57.18	59.23
Bra013777.1-P	Field mustard	cytosol	57.18	59.23
KRH52063	Soybean	nucleus	56.68	59.02
CDY08911	Canola	cytosol	56.93	58.97
Bra010499.1-P	Field mustard	cytosol	56.68	58.72
CDY24831	Canola	cytosol	56.68	58.72
VIT_03s0091g00450.t01	Wine grape	cytosol	55.94	58.1
AT4G24220.1	Thale cress	cytosol	55.2	57.47
Bra019241.1-P	Field mustard	cytosol	53.71	57.26
CDY10994	Canola	cytosol	53.71	57.26
CDX92623	Canola	cytosol	53.71	57.11
Solyc10g049600.1.1	Tomato	cytosol	53.96	56.62
VIT_18s0001g09420.t01	Wine grape	cytosol	54.46	56.41
PGSC0003DMT400025509	Potato	cytosol	53.22	55.41
PGSC0003DMT400039098	Potato	cytosol	52.72	54.9
CDY36344	Canola	extracellular	11.14	52.33
PGSC0003DMT400071398	Potato	cytosol	46.53	47.47
Solyc01g091670.2.1	Tomato	cytosol	45.79	47.19
KRH15431	Soybean	cytosol	7.92	47.06
HORVU3Hr1G055170.1	Barley	mitochondrion	9.65	46.43

Protein Annotations

EnsemblPlants:HORVU3Hr1G111650.1	EnsemblPlantsGene:HORVU3Hr1G111650	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR32487	PANTHER:PTHR32487:SF10
SEG:seg	SUPFAM:SSF51735	UniParc:UPI000294851E	UniProt:M0UDP2	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr3H:+:683874744..683876849

Molecular Weight (calculated)

44924.0 Da

IEP (calculated)

4.660

GRAVY (calculated)

-0.198

Length

404 amino acids

Sequence
(BLAST)

001: MSWWWAGAVG AVKKRQDERA AAAEPTFQSV ALILGSTGIV GTSLLDILPR DDTPGGLWKV YAVSRRAPPA WSTPPPSPAV THLQLDLADP AAVKDALGPL
101: TDVTHVFYAA WSSHETEDRN REVNAGMLRN VLSVVVPNCP ALAHVCLQTG RKHYVGPFDV IGKIPAPDPP YTEDMPRLDH PNFYYDLEDV LFDEVSRRDG
201: AVSWSVHRPT VIFGFSPRSA MNVVGSLCVY AAICRKEGAT LRWPGCQVAW EGFTDASDAD LVAEHEIWAA VDPFAKNEAF NCSNGDVFKW KQLWPMLADR
301: FGVEWAGYEG EDNRFSLSDA MAGKEAVWTE ILQENELVTT ELEEITSWGF VDAMFNIDIE HLDNMNKSKE HGFLGFRNTI NSFIAWIDKM KASKEVDLPK
401: QQIL

Best Arabidopsis Sequence Match ( AT4G24220.1 )
(BLAST)

001: MSWWWAGAIG AAKKKLDEDE PSQSFESVAL IIGVTGIVGN SLAEILPLSD TPGGPWKVYG VARRPRPTWN ADHPIDYIQC DVSDAEDTRS KLSPLTDVTH
101: VFYVTWTNRE SESENCEANG SMLRNVLQAI IPYAPNLRHV CLQTGTKHYL GPFTNVDGPR HDPPFTEDMP RLQIQNFYYT QEDILFEEIK KIETVTWSIH
201: RPNMIFGFSP YSLMNIVGTL CVYAAICKHE GSPLLFPGSK KAWEGFMTAS DADLIAEQQI WAAVDPYAKN EAFNCNNADI FKWKHLWKIL AEQFGIEEYG
301: FEEGKNLGLV EMMKGKERVW EEMVKENQLQ EKKLEEVGVW WFADVILGVE GMIDSMNKSK EYGFLGFRNS NNSFISWIDK YKAFKIVP

Arabidopsis Description

VEP13-oxo-Delta(4,5)-steroid 5-beta-reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9STX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.