Factsheet for PGSC0003DMT400013949

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
endoplasmic reticulum 1
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g049620.1.1	Tomato	plastid	97.68	97.68
PGSC0003DMT400025509	Potato	cytosol	79.38	79.38
PGSC0003DMT400039098	Potato	cytosol	79.12	79.12
VIT_18s0001g09420.t01	Wine grape	cytosol	74.74	74.36
KRH52063	Soybean	nucleus	73.97	73.97
CDY03474	Canola	cytosol	73.97	73.78
Bra013777.1-P	Field mustard	cytosol	73.97	73.59
CDY34267	Canola	cytosol	73.97	73.59
AT4G24220.1	Thale cress	cytosol	73.2	73.2
CDY08911	Canola	cytosol	73.45	73.08
CDY24831	Canola	cytosol	73.2	72.82
Bra010499.1-P	Field mustard	cytosol	73.2	72.82
Bra019241.1-P	Field mustard	cytosol	67.01	68.6
CDY10994	Canola	cytosol	66.75	68.34
CDX92623	Canola	cytosol	66.75	68.16
KRH15431	Soybean	cytosol	11.34	64.71
GSMUA_Achr3P30170_001	Banana	cytosol	57.22	63.98
GSMUA_Achr4P16440_001	Banana	cytosol	56.96	63.87
CDY36344	Canola	extracellular	13.66	61.63
GSMUA_Achr6P24680_001	Banana	golgi	47.68	61.46
TraesCS3A01G507400.1	Wheat	golgi	60.82	59.45
TraesCS3B01G575500.1	Wheat	golgi	60.57	59.19
Zm00001d029582_P001	Maize	extracellular	59.79	58.59
EER92090	Sorghum	cytosol	59.02	57.83
PGSC0003DMT400071398	Potato	cytosol	59.02	57.83
Os03t0436400-01	Rice	plasma membrane	58.76	57.58
Os11t0351555-01	Rice	cytosol	58.76	57.58
TraesCS3A01G506600.1	Wheat	mitochondrion	57.99	57.25
TraesCS3A01G506400.1	Wheat	extracellular	39.95	57.2
TraesCS3A01G506500.1	Wheat	extracellular	39.95	57.2
HORVU3Hr1G111650.1	Barley	cytosol, mitochondrion	59.54	57.18
TraesCS3D01G514300.1	Wheat	plastid	56.96	56.23
TraesCS3D01G514400.1	Wheat	plastid	56.96	55.67
TraesCS3A01G508600.1	Wheat	cytosol	56.19	55.47
TraesCS3B01G574600.1	Wheat	mitochondrion	55.67	54.96
HORVU0Hr1G007340.1	Barley	plastid	54.64	53.13
EES08251	Sorghum	mitochondrion	56.44	53.03
Os07t0601600-00	Rice	plasma membrane	55.93	52.93
Zm00001d029581_P001	Maize	cytosol	54.64	52.87
HORVU7Hr1G038590.1	Barley	mitochondrion	53.09	52.69
Zm00001d029580_P001	Maize	cytosol	54.38	52.62
TraesCS7D01G191000.1	Wheat	mitochondrion	53.09	52.42
TraesCS7B01G094800.1	Wheat	mitochondrion	53.09	52.28
Os03t0422600-00	Rice	mitochondrion	33.76	47.99
OQU92343	Sorghum	golgi	44.33	44.1
HORVU3Hr1G055170.1	Barley	mitochondrion	8.76	40.48

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	ProteinID:AEX31544	ProteinID:AEX31544.1	InterPro:Epimerase_deHydtase	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0047787
GO:GO:0050662	GO:GO:0055114	EMBL:JF504669	UniProt:M1A3I7	InterPro:NAD(P)-bd_dom_sf	PFAM:PF01370
EnsemblPlantsGene:PGSC0003DMG400005459	PGSC:PGSC0003DMG400005459	EnsemblPlants:PGSC0003DMT400013949	PANTHER:PTHR32487	PANTHER:PTHR32487:SF0	SUPFAM:SSF51735
UniParc:UPI000294F405	SEG:seg	:	:	:	:

Description

Progesterone 5 beta-reductase [Source:PGSC_GENE;Acc:PGSC0003DMG400005459]

Coordinates

chr10:-:14818106..14819740

Molecular Weight (calculated)

43838.3 Da

IEP (calculated)

5.941

GRAVY (calculated)

-0.230

Length

388 amino acids

Sequence
(BLAST)

001: MSWWWAGAIG AAKKKFEEDE APPKYESVAL IIGVTGIVGN SLAEILPLAD TPGGPWKVYG VARRARPSWN ADHPIEYVQC DISNPEDTQS KLSVLTDVTH
101: VFYVTWANRS KEVENCEING KMFRNVLNVI IPNCPHLRHI CLQTGRKHYL GPFELYGKVS HDSPFHEDLP RLDAPNFYYV LEDILFKEVE KKEGLTWSVH
201: RPGTIFGFSP YSLMNIVGTL CVYAAICKHE GLPLKFPGVK GAWDGYSDCS DADLIAEHQI WAAVDPYAKN EAFNVSNGDV FKWKHFWKVL AEQFGVEAAE
301: FDEGKRCTLV EMMKDKGAVW DEIVKENGLV PTKLEEVGVW WFADLMLSGD CPLDTMNKSK EHGFLGFRNS QKAFISWIDK VKAYKVVP

Best Arabidopsis Sequence Match ( AT4G24220.1 )
(BLAST)

001: MSWWWAGAIG AAKKKLDEDE PSQSFESVAL IIGVTGIVGN SLAEILPLSD TPGGPWKVYG VARRPRPTWN ADHPIDYIQC DVSDAEDTRS KLSPLTDVTH
101: VFYVTWTNRE SESENCEANG SMLRNVLQAI IPYAPNLRHV CLQTGTKHYL GPFTNVDGPR HDPPFTEDMP RLQIQNFYYT QEDILFEEIK KIETVTWSIH
201: RPNMIFGFSP YSLMNIVGTL CVYAAICKHE GSPLLFPGSK KAWEGFMTAS DADLIAEQQI WAAVDPYAKN EAFNCNNADI FKWKHLWKIL AEQFGIEEYG
301: FEEGKNLGLV EMMKGKERVW EEMVKENQLQ EKKLEEVGVW WFADVILGVE GMIDSMNKSK EYGFLGFRNS NNSFISWIDK YKAFKIVP

Arabidopsis Description

VEP13-oxo-Delta(4,5)-steroid 5-beta-reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9STX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.