CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0601600-00	Rice	plasma membrane	72.16	72.68
Zm00001d029580_P001	Maize	cytosol	68.04	70.07
EER92090	Sorghum	cytosol	67.07	69.95
Zm00001d029581_P001	Maize	cytosol	67.31	69.33
Os03t0422600-00	Rice	mitochondrion	42.37	64.1
GSMUA_Achr3P30170_001	Banana	cytosol	52.78	62.82
GSMUA_Achr4P16440_001	Banana	cytosol	52.3	62.43
CDY03474	Canola	cytosol	56.66	60.15
KRH52063	Soybean	nucleus	56.42	60.05
GSMUA_Achr6P24680_001	Banana	golgi	43.34	59.47
Bra013777.1-P	Field mustard	cytosol	55.93	59.23
CDY34267	Canola	cytosol	55.93	59.23
CDY08911	Canola	cytosol	55.69	58.97
Bra010499.1-P	Field mustard	cytosol	55.21	58.46
CDY24831	Canola	cytosol	55.21	58.46
AT4G24220.1	Thale cress	cytosol	54.72	58.25
CDX92623	Canola	cytosol	53.03	57.63
Bra019241.1-P	Field mustard	cytosol	52.78	57.52
CDY10994	Canola	cytosol	52.78	57.52
KRH15431	Soybean	cytosol	9.44	57.35
VIT_18s0001g09420.t01	Wine grape	cytosol	53.51	56.67
PGSC0003DMT400013949	Potato	cytosol	53.03	56.44
Solyc10g049620.1.1	Tomato	plastid	52.78	56.19
VIT_03s0091g00450.t01	Wine grape	cytosol	52.54	55.78
Solyc10g049600.1.1	Tomato	cytosol	51.82	55.58
PGSC0003DMT400025509	Potato	cytosol	51.09	54.38
OQU92343	Sorghum	golgi	51.09	54.1
PGSC0003DMT400039098	Potato	cytosol	50.12	53.35
CDY36344	Canola	extracellular	9.93	47.67
PGSC0003DMT400071398	Potato	cytosol	45.52	47.47
Solyc01g091670.2.1	Tomato	cytosol	43.83	46.17

Protein Annotations

EnsemblPlants:EES08251	EnsemblPlantsGene:SORBI_3005G085000	EntrezGene:8057144	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR32487
PANTHER:PTHR32487:SF10	ProteinID:EES08251	ProteinID:EES08251.1	RefSeq:XP_002449263.1	SEG:seg	SUPFAM:SSF51735
unigene:Sbi.2535	UniParc:UPI0001A86618	UniProt:C5Y7R9	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr5:+:11585977..11587872

Molecular Weight (calculated)

45934.6 Da

IEP (calculated)

7.071

GRAVY (calculated)

-0.181

Length

413 amino acids

Sequence
(BLAST)

001: MSMSWWWRGA IGATRRRQDE HATATTERRP FQSVALVVGC TGIVGASLVD ILPLPDTPGG PWKVYALSRR PLPPWWQYRH PPSSSSSVVT HLQVDLTDSA
101: AVAKTLTPLT DITHVFYAAL SAPSTVDEAK NREANSAMLR SVLAAVVPNC PRLRHVCLQT GTKHYMGPPA SFGRRTTAHD PPYTEDMPRL DWPNFYYDQE
201: DVLLDAVAAG AGAVTWSVHR PSLVFGFSPR SAMNVVCSLC VYAAICRKDG VPLQWPGSLG AWEGFSNASD ADLVAEQQVW AAVVDHPMGM AKNEAFNCSN
301: GDVFRWRQLW PILAGRFGVE WAGYRGEENR VKLVDAMAGK EPVWAEIVEE SQLVPTQLHE VANWWFVDAL FCAKWEFLDS MNKSKEHGFL GFRNTAKSFD
401: NWIDKMKACK IVP

Best Arabidopsis Sequence Match ( AT4G24220.1 )
(BLAST)

001: MSWWWAGAIG AAKKKLDEDE PSQSFESVAL IIGVTGIVGN SLAEILPLSD TPGGPWKVYG VARRPRPTWN ADHPIDYIQC DVSDAEDTRS KLSPLTDVTH
101: VFYVTWTNRE SESENCEANG SMLRNVLQAI IPYAPNLRHV CLQTGTKHYL GPFTNVDGPR HDPPFTEDMP RLQIQNFYYT QEDILFEEIK KIETVTWSIH
201: RPNMIFGFSP YSLMNIVGTL CVYAAICKHE GSPLLFPGSK KAWEGFMTAS DADLIAEQQI WAAVDPYAKN EAFNCNNADI FKWKHLWKIL AEQFGIEEYG
301: FEEGKNLGLV EMMKGKERVW EEMVKENQLQ EKKLEEVGVW WFADVILGVE GMIDSMNKSK EYGFLGFRNS NNSFISWIDK YKAFKIVP

Arabidopsis Description

VEP13-oxo-Delta(4,5)-steroid 5-beta-reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9STX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.