Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24831 | Canola | cytosol | 97.18 | 97.18 |
| CDY03474 | Canola | cytosol | 89.49 | 89.72 |
| CDY34267 | Canola | cytosol | 88.21 | 88.21 |
| AT4G24220.1 | Thale cress | cytosol | 87.69 | 88.14 |
| CDY10994 | Canola | cytosol | 80.0 | 82.32 |
| CDX92623 | Canola | cytosol | 79.74 | 81.84 |
| KRH52063 | Soybean | nucleus | 73.59 | 73.97 |
| PGSC0003DMT400013949 | Potato | cytosol | 73.08 | 73.45 |
| Solyc10g049620.1.1 | Tomato | plastid | 72.56 | 72.94 |
| CDY36344 | Canola | extracellular | 15.9 | 72.09 |
| VIT_18s0001g09420.t01 | Wine grape | cytosol | 70.26 | 70.26 |
| PGSC0003DMT400025509 | Potato | cytosol | 67.95 | 68.3 |
| Solyc10g049600.1.1 | Tomato | cytosol | 66.15 | 67.01 |
| PGSC0003DMT400039098 | Potato | cytosol | 65.38 | 65.72 |
| GSMUA_Achr4P16440_001 | Banana | cytosol | 58.21 | 65.61 |
| GSMUA_Achr3P30170_001 | Banana | cytosol | 58.21 | 65.42 |
| KRH15431 | Soybean | cytosol | 10.51 | 60.29 |
| Zm00001d029582_P001 | Maize | extracellular | 60.0 | 59.09 |
| EER92090 | Sorghum | cytosol | 60.0 | 59.09 |
| TraesCS3A01G507400.1 | Wheat | golgi | 60.0 | 58.94 |
| Os03t0436400-01 | Rice | plasma membrane | 59.74 | 58.84 |
| Os11t0351555-01 | Rice | cytosol | 59.74 | 58.84 |
| GSMUA_Achr6P24680_001 | Banana | golgi | 45.38 | 58.8 |
| TraesCS3A01G506500.1 | Wheat | extracellular | 40.77 | 58.67 |
| TraesCS3A01G506400.1 | Wheat | extracellular | 40.77 | 58.67 |
| TraesCS3B01G575500.1 | Wheat | golgi | 59.23 | 58.19 |
| TraesCS3D01G514300.1 | Wheat | plastid | 57.69 | 57.25 |
| HORVU3Hr1G111650.1 | Barley | cytosol, mitochondrion | 58.97 | 56.93 |
| TraesCS3A01G506600.1 | Wheat | mitochondrion | 57.18 | 56.74 |
| TraesCS3D01G514400.1 | Wheat | plastid | 57.44 | 56.42 |
| TraesCS3B01G574600.1 | Wheat | mitochondrion | 56.41 | 55.98 |
| TraesCS3A01G508600.1 | Wheat | cytosol | 56.41 | 55.98 |
| EES08251 | Sorghum | mitochondrion | 58.97 | 55.69 |
| Solyc01g091670.2.1 | Tomato | cytosol | 55.64 | 55.36 |
| PGSC0003DMT400071398 | Potato | cytosol | 56.15 | 55.3 |
| Os07t0601600-00 | Rice | plasma membrane | 57.18 | 54.39 |
| HORVU0Hr1G007340.1 | Barley | plastid | 55.38 | 54.14 |
| Zm00001d029580_P001 | Maize | cytosol | 55.38 | 53.87 |
| TraesCS7D01G191000.1 | Wheat | mitochondrion | 53.08 | 52.67 |
| Zm00001d029581_P001 | Maize | cytosol | 54.1 | 52.62 |
| HORVU7Hr1G038590.1 | Barley | mitochondrion | 52.56 | 52.43 |
| TraesCS7B01G094800.1 | Wheat | mitochondrion | 52.82 | 52.28 |
| Os03t0422600-00 | Rice | mitochondrion | 35.64 | 50.92 |
| OQU92343 | Sorghum | golgi | 45.64 | 45.64 |
| HORVU3Hr1G055170.1 | Barley | mitochondrion | 8.46 | 39.29 |
| CDY67905 | Canola | cytosol | 34.87 | 35.14 |
| CDY52126 | Canola | cytosol | 34.36 | 34.81 |
Protein Annotations
| EnsemblPlants:CDY08911 | EnsemblPlantsGene:GSBRNA2T00000931001 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR32487 | PANTHER:PTHR32487:SF0 |
| ProteinID:CDY08911 | ProteinID:CDY08911.1 | SEG:seg | SUPFAM:SSF51735 | UniParc:UPI0004EBC575 | UniProt:A0A078F679 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC08g11410DBnaC08g11410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F679]
Coordinates
chrLK031990:+:469955..471491
Molecular Weight (calculated)
44208.5 Da
IEP (calculated)
5.202
GRAVY (calculated)
-0.313
Length
390 amino acids
Sequence
(BLAST)
(BLAST)
001: MSWWWAGAIG AAKKKFDEDE PTQTYESVAL IIGVTGIVGN SLAEILPLSD TPGGPWKVYG VARRPRPTWN ADHPIDYIQC DVSDEEDARS KLSPLRDVTH
101: VFYVTWTNRS VESENCKVNG SMLRNVLRAV VPNAPNLRHV CLQTGTKHYL GPFDSVGKAV DRHEAPFTED MPRLKVDNFY YTLEDVLSEE IKMKESVTWS
201: VHRPNTIFGF SPYSLMNIVG TLCVYAAICK HEGSKLVFPG SKEAWEGFTT ASDADLVAEQ QIWAAVDPYA KNEAFNCSNA DVFKWKHLWK ILAEQFGIEE
301: YGFEEGKNVG LVEMMKGKER VWEEMVKENQ LQVKKLDEVG VWWFADVVLG VDGMIDSMNK SKEYGFLGFR NSNNSFISWI DKYKAFKIVP
101: VFYVTWTNRS VESENCKVNG SMLRNVLRAV VPNAPNLRHV CLQTGTKHYL GPFDSVGKAV DRHEAPFTED MPRLKVDNFY YTLEDVLSEE IKMKESVTWS
201: VHRPNTIFGF SPYSLMNIVG TLCVYAAICK HEGSKLVFPG SKEAWEGFTT ASDADLVAEQ QIWAAVDPYA KNEAFNCSNA DVFKWKHLWK ILAEQFGIEE
301: YGFEEGKNVG LVEMMKGKER VWEEMVKENQ LQVKKLDEVG VWWFADVVLG VDGMIDSMNK SKEYGFLGFR NSNNSFISWI DKYKAFKIVP
001: MSWWWAGAIG AAKKKLDEDE PSQSFESVAL IIGVTGIVGN SLAEILPLSD TPGGPWKVYG VARRPRPTWN ADHPIDYIQC DVSDAEDTRS KLSPLTDVTH
101: VFYVTWTNRE SESENCEANG SMLRNVLQAI IPYAPNLRHV CLQTGTKHYL GPFTNVDGPR HDPPFTEDMP RLQIQNFYYT QEDILFEEIK KIETVTWSIH
201: RPNMIFGFSP YSLMNIVGTL CVYAAICKHE GSPLLFPGSK KAWEGFMTAS DADLIAEQQI WAAVDPYAKN EAFNCNNADI FKWKHLWKIL AEQFGIEEYG
301: FEEGKNLGLV EMMKGKERVW EEMVKENQLQ EKKLEEVGVW WFADVILGVE GMIDSMNKSK EYGFLGFRNS NNSFISWIDK YKAFKIVP
101: VFYVTWTNRE SESENCEANG SMLRNVLQAI IPYAPNLRHV CLQTGTKHYL GPFTNVDGPR HDPPFTEDMP RLQIQNFYYT QEDILFEEIK KIETVTWSIH
201: RPNMIFGFSP YSLMNIVGTL CVYAAICKHE GSPLLFPGSK KAWEGFMTAS DADLIAEQQI WAAVDPYAKN EAFNCNNADI FKWKHLWKIL AEQFGIEEYG
301: FEEGKNLGLV EMMKGKERVW EEMVKENQLQ EKKLEEVGVW WFADVILGVE GMIDSMNKSK EYGFLGFRNS NNSFISWIDK YKAFKIVP
Arabidopsis Description
VEP13-oxo-Delta(4,5)-steroid 5-beta-reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9STX2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.