Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY03474 | Canola | cytosol | 88.92 | 88.69 |
| CDY08911 | Canola | cytosol | 88.14 | 87.69 |
| Bra010499.1-P | Field mustard | cytosol | 87.89 | 87.44 |
| CDY24831 | Canola | cytosol | 87.89 | 87.44 |
| Bra013777.1-P | Field mustard | cytosol | 87.11 | 86.67 |
| CDY34267 | Canola | cytosol | 87.11 | 86.67 |
| Bra019241.1-P | Field mustard | cytosol | 81.44 | 83.38 |
| CDY10994 | Canola | cytosol | 80.93 | 82.85 |
| CDX92623 | Canola | cytosol | 79.12 | 80.79 |
| KRH52063 | Soybean | nucleus | 73.97 | 73.97 |
| Solyc10g049620.1.1 | Tomato | plastid | 73.2 | 73.2 |
| PGSC0003DMT400013949 | Potato | cytosol | 73.2 | 73.2 |
| VIT_18s0001g09420.t01 | Wine grape | cytosol | 71.65 | 71.28 |
| PGSC0003DMT400025509 | Potato | cytosol | 69.85 | 69.85 |
| Solyc10g049600.1.1 | Tomato | cytosol | 68.04 | 68.57 |
| PGSC0003DMT400039098 | Potato | cytosol | 67.78 | 67.78 |
| GSMUA_Achr4P16440_001 | Banana | cytosol | 58.51 | 65.61 |
| KRH15431 | Soybean | cytosol | 11.34 | 64.71 |
| GSMUA_Achr3P30170_001 | Banana | cytosol | 55.67 | 62.25 |
| GSMUA_Achr6P24680_001 | Banana | golgi | 46.65 | 60.13 |
| Zm00001d029582_P001 | Maize | extracellular | 59.79 | 58.59 |
| EER92090 | Sorghum | cytosol | 59.28 | 58.08 |
| Os03t0436400-01 | Rice | plasma membrane | 59.28 | 58.08 |
| Os11t0351555-01 | Rice | cytosol | 59.28 | 58.08 |
| TraesCS3A01G507400.1 | Wheat | golgi | 58.76 | 57.43 |
| TraesCS3D01G514300.1 | Wheat | plastid | 57.99 | 57.25 |
| TraesCS3A01G506400.1 | Wheat | extracellular | 39.95 | 57.2 |
| TraesCS3A01G506500.1 | Wheat | extracellular | 39.95 | 57.2 |
| TraesCS3B01G575500.1 | Wheat | golgi | 58.51 | 57.18 |
| TraesCS3A01G506600.1 | Wheat | mitochondrion | 57.73 | 57.0 |
| TraesCS3A01G508600.1 | Wheat | cytosol | 56.96 | 56.23 |
| TraesCS3B01G574600.1 | Wheat | mitochondrion | 56.96 | 56.23 |
| TraesCS3D01G514400.1 | Wheat | plastid | 57.47 | 56.17 |
| HORVU3Hr1G111650.1 | Barley | cytosol, mitochondrion | 57.47 | 55.2 |
| Zm00001d029580_P001 | Maize | cytosol | 56.7 | 54.86 |
| PGSC0003DMT400071398 | Potato | cytosol | 55.93 | 54.8 |
| EES08251 | Sorghum | mitochondrion | 58.25 | 54.72 |
| HORVU0Hr1G007340.1 | Barley | plastid | 55.67 | 54.14 |
| Solyc01g091670.2.1 | Tomato | cytosol | 54.64 | 54.08 |
| Os07t0601600-00 | Rice | plasma membrane | 56.7 | 53.66 |
| Zm00001d029581_P001 | Maize | cytosol | 55.41 | 53.62 |
| TraesCS7D01G191000.1 | Wheat | mitochondrion | 52.58 | 51.91 |
| TraesCS7B01G094800.1 | Wheat | mitochondrion | 52.58 | 51.78 |
| HORVU7Hr1G038590.1 | Barley | mitochondrion | 51.55 | 51.15 |
| Os03t0422600-00 | Rice | mitochondrion | 33.76 | 47.99 |
| OQU92343 | Sorghum | golgi | 44.59 | 44.36 |
| HORVU3Hr1G055170.1 | Barley | mitochondrion | 7.99 | 36.9 |
| AT5G58750.1 | Thale cress | cytosol | 34.02 | 34.2 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | EntrezGene:828523 | UniProt:A0A178V158 | ProteinID:AEE84868.1 | ProteinID:AEE84869.1 |
| ArrayExpress:AT4G24220 | EnsemblPlantsGene:AT4G24220 | RefSeq:AT4G24220 | TAIR:AT4G24220 | RefSeq:AT4G24220-TAIR-G | EnsemblPlants:AT4G24220.1 |
| TAIR:AT4G24220.1 | EMBL:AY062451 | EMBL:AY087323 | Unigene:At.32364 | EMBL:BT008479 | ProteinID:CAA68126.1 |
| ProteinID:CAB45057.1 | ProteinID:CAB79332.1 | EMBL:EF579963 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006629 | GO:GO:0006950 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008202 | GO:GO:0009611 | GO:GO:0010051 |
| GO:GO:0016491 | GO:GO:0035671 | GO:GO:0047787 | GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_001078438.1 |
| RefSeq:NP_194153.1 | ProteinID:OAO99094.1 | PO:PO:0000013 | PO:PO:0000036 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PANTHER:PTHR32487 | PANTHER:PTHR32487:SF0 | UniProt:Q9STX2 | SUPFAM:SSF51735 | UniParc:UPI000009CBFC | Symbol:VEP1 |
| SEG:seg | : | : | : | : | : |
Description
VEP13-oxo-Delta(4,5)-steroid 5-beta-reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9STX2]
Coordinates
chr4:+:12564945..12566755
Molecular Weight (calculated)
44232.6 Da
IEP (calculated)
4.841
GRAVY (calculated)
-0.326
Length
388 amino acids
Sequence
(BLAST)
(BLAST)
001: MSWWWAGAIG AAKKKLDEDE PSQSFESVAL IIGVTGIVGN SLAEILPLSD TPGGPWKVYG VARRPRPTWN ADHPIDYIQC DVSDAEDTRS KLSPLTDVTH
101: VFYVTWTNRE SESENCEANG SMLRNVLQAI IPYAPNLRHV CLQTGTKHYL GPFTNVDGPR HDPPFTEDMP RLQIQNFYYT QEDILFEEIK KIETVTWSIH
201: RPNMIFGFSP YSLMNIVGTL CVYAAICKHE GSPLLFPGSK KAWEGFMTAS DADLIAEQQI WAAVDPYAKN EAFNCNNADI FKWKHLWKIL AEQFGIEEYG
301: FEEGKNLGLV EMMKGKERVW EEMVKENQLQ EKKLEEVGVW WFADVILGVE GMIDSMNKSK EYGFLGFRNS NNSFISWIDK YKAFKIVP
101: VFYVTWTNRE SESENCEANG SMLRNVLQAI IPYAPNLRHV CLQTGTKHYL GPFTNVDGPR HDPPFTEDMP RLQIQNFYYT QEDILFEEIK KIETVTWSIH
201: RPNMIFGFSP YSLMNIVGTL CVYAAICKHE GSPLLFPGSK KAWEGFMTAS DADLIAEQQI WAAVDPYAKN EAFNCNNADI FKWKHLWKIL AEQFGIEEYG
301: FEEGKNLGLV EMMKGKERVW EEMVKENQLQ EKKLEEVGVW WFADVILGVE GMIDSMNKSK EYGFLGFRNS NNSFISWIDK YKAFKIVP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.