CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

cytosol 1
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	golgi
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G094800.1	Wheat	mitochondrion	62.82	62.18
TraesCS7D01G191000.1	Wheat	mitochondrion	61.79	61.32
HORVU7Hr1G038590.1	Barley	mitochondrion	59.23	59.08
EER92090	Sorghum	cytosol	57.18	56.31
GSMUA_Achr4P16440_001	Banana	cytosol	45.38	51.16
EES08251	Sorghum	mitochondrion	54.1	51.09
GSMUA_Achr3P30170_001	Banana	cytosol	43.85	49.28
CDY03474	Canola	cytosol	46.41	46.53
Bra013777.1-P	Field mustard	cytosol	46.41	46.41
CDY34267	Canola	cytosol	46.41	46.41
KRH52063	Soybean	nucleus	45.64	45.88
GSMUA_Achr6P24680_001	Banana	golgi	35.38	45.85
CDY08911	Canola	cytosol	45.64	45.64
Bra010499.1-P	Field mustard	cytosol	45.38	45.38
CDY24831	Canola	cytosol	45.38	45.38
Solyc10g049600.1.1	Tomato	cytosol	44.36	44.94
AT4G24220.1	Thale cress	cytosol	44.36	44.59
PGSC0003DMT400013949	Potato	cytosol	44.1	44.33
Solyc10g049620.1.1	Tomato	plastid	43.85	44.07
VIT_18s0001g09420.t01	Wine grape	cytosol	43.59	43.59
Bra019241.1-P	Field mustard	cytosol	42.31	43.54
CDX92623	Canola	cytosol	42.31	43.42
PGSC0003DMT400025509	Potato	cytosol	43.08	43.3
CDY10994	Canola	cytosol	41.79	43.01
VIT_03s0091g00450.t01	Wine grape	cytosol	42.82	42.93
PGSC0003DMT400039098	Potato	cytosol	42.56	42.78
CDY36344	Canola	extracellular	9.23	41.86
KRH15431	Soybean	cytosol	6.67	38.24
PGSC0003DMT400071398	Potato	cytosol	36.92	36.36
Solyc01g091670.2.1	Tomato	cytosol	35.38	35.2

Protein Annotations

EnsemblPlants:OQU92343	EnsemblPlantsGene:SORBI_3001G330600	Gene3D:3.40.50.720	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR32487	PANTHER:PTHR32487:SF10	ProteinID:OQU92343	ProteinID:OQU92343.1	SEG:seg
SUPFAM:SSF51735	TMHMM:TMhelix	UniParc:UPI000B8BB001	UniProt:A0A1Z5S8T9	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr1:-:61830723..61831895

Molecular Weight (calculated)

43005.2 Da

IEP (calculated)

5.117

GRAVY (calculated)

-0.062

Length

390 amino acids

Sequence
(BLAST)

001: MECEGTKKVV LVIGSTGIVG SALINLLLLE NPKNPVGSCK KVYALSRRPM PPWYMTASSS SFSSNNDPIP TVIHLHVDLA DDAAVTKALA PLTDITHVFY
101: VTWAPRHGWS NTEAHTVNRA MLSSVLSAVI PNAPDLKHVA LQSGRNQSAD PFQPPVRGAF AEDGWLGPFS EDLPRPDYPD LEDALIDGIA SRVGDVTWSV
201: HRPATILGFS PRSSRNLVSS LCVYAAICSK EGAVLRWPGS LVAWEGFSDA CDAWLIAVQA IWAAMMARPN EAFNCGNGDV FKWKQLWPIL ASYFGVPWAG
301: YEGEDQRFKL EEAMVGKEPV WAEIINENGL VETELDDITT WWLVDAVVNA EKEHVETMNK SKEFGFHSIY DTVRCFDTCI RKMKASRIVP

Best Arabidopsis Sequence Match ( AT4G24220.2 )
(BLAST)

001: MSWWWAGAIG AAKKLDEDEP SQSFESVALI IGVTGIVGNS LAEILPLSDT PGGPWKVYGV ARRPRPTWNA DHPIDYIQCD VSDAEDTRSK LSPLTDVTHV
101: FYVTWTNRES ESENCEANGS MLRNVLQAII PYAPNLRHVC LQTGTKHYLG PFTNVDGPRH DPPFTEDMPR LQIQNFYYTQ EDILFEEIKK IETVTWSIHR
201: PNMIFGFSPY SLMNIVGTLC VYAAICKHEG SPLLFPGSKK AWEGFMTASD ADLIAEQQIW AAVDPYAKNE AFNCNNADIF KWKHLWKILA EQFGIEEYGF
301: EEGKNLGLVE MMKGKERVWE EMVKENQLQE KKLEEVGVWW FADVILGVEG MIDSMNKSKE YGFLGFRNSN NSFISWIDKY KAFKIVP

Arabidopsis Description

VEP13-oxo-Delta(4,5)-steroid 5-beta-reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9STX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.