Factsheet for PGSC0003DMT400039098

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400025509	Potato	cytosol	89.95	89.95
PGSC0003DMT400013949	Potato	cytosol	79.12	79.12
VIT_18s0001g09420.t01	Wine grape	cytosol	70.62	70.26
KRH52063	Soybean	nucleus	68.3	68.3
AT4G24220.1	Thale cress	cytosol	67.78	67.78
Bra013777.1-P	Field mustard	cytosol	68.04	67.69
CDY34267	Canola	cytosol	68.04	67.69
CDY03474	Canola	cytosol	67.78	67.61
Bra010499.1-P	Field mustard	cytosol	65.72	65.38
CDY24831	Canola	cytosol	65.72	65.38
CDY08911	Canola	cytosol	65.72	65.38
Bra019241.1-P	Field mustard	cytosol	62.37	63.85
CDY10994	Canola	cytosol	62.11	63.59
CDX92623	Canola	cytosol	62.11	63.42
KRH15431	Soybean	cytosol	10.82	61.76
GSMUA_Achr4P16440_001	Banana	cytosol	51.8	58.09
GSMUA_Achr3P30170_001	Banana	cytosol	51.29	57.35
PGSC0003DMT400071398	Potato	cytosol	58.25	57.07
CDY36344	Canola	extracellular	12.63	56.98
GSMUA_Achr6P24680_001	Banana	golgi	43.3	55.81
TraesCS3A01G507400.1	Wheat	golgi	55.93	54.66
TraesCS3B01G575500.1	Wheat	golgi	55.67	54.41
Os03t0436400-01	Rice	plasma membrane	55.41	54.29
Os11t0351555-01	Rice	cytosol	55.41	54.29
TraesCS3A01G506600.1	Wheat	mitochondrion	54.38	53.69
Zm00001d029582_P001	Maize	extracellular	54.64	53.54
TraesCS3D01G514300.1	Wheat	plastid	53.61	52.93
EER92090	Sorghum	cytosol	53.87	52.78
HORVU3Hr1G111650.1	Barley	cytosol, mitochondrion	54.9	52.72
TraesCS3D01G514400.1	Wheat	plastid	53.87	52.64
TraesCS3A01G506400.1	Wheat	extracellular	36.6	52.4
TraesCS3A01G506500.1	Wheat	extracellular	36.6	52.4
TraesCS3A01G508600.1	Wheat	cytosol	52.84	52.16
TraesCS3B01G574600.1	Wheat	mitochondrion	52.58	51.91
Zm00001d029580_P001	Maize	cytosol	52.84	51.12
Zm00001d029581_P001	Maize	cytosol	52.32	50.62
HORVU7Hr1G038590.1	Barley	mitochondrion	50.52	50.13
EES08251	Sorghum	mitochondrion	53.35	50.12
HORVU0Hr1G007340.1	Barley	plastid	51.29	49.87
TraesCS7D01G191000.1	Wheat	mitochondrion	50.52	49.87
TraesCS7B01G094800.1	Wheat	mitochondrion	50.52	49.75
Os07t0601600-00	Rice	plasma membrane	51.03	48.29
Os03t0422600-00	Rice	mitochondrion	32.22	45.79
OQU92343	Sorghum	golgi	42.78	42.56
HORVU3Hr1G055170.1	Barley	mitochondrion	7.22	33.33

Protein Annotations

EnsemblPlants:PGSC0003DMT400039098	EnsemblPlantsGene:PGSC0003DMG400015119	EntrezGene:102585153	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR32487
PANTHER:PTHR32487:SF0	PGSC:PGSC0003DMG400015119	RefSeq:XP_006367946.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI0002961AFE
UniProt:M1B7S7	MapMan:35.1	:	:	:	:

Description

Progesterone 5 beta-reductase [Source:PGSC_GENE;Acc:PGSC0003DMG400015119]

Coordinates

chr00:+:31941373..31945619

Molecular Weight (calculated)

44541.3 Da

IEP (calculated)

5.808

GRAVY (calculated)

-0.303

Length

388 amino acids

Sequence
(BLAST)

001: MSWWWSRAIG ATKEKVEEDD VPKKCQSVGL IIGVTGIVGN SLAEILPGTD TPGGPWKVYG VARRPRPSWN VNYPIEYIQC DISSPEETQS KLTLLTDVTH
101: VFYVTWAIRP TELENCEING KMFQNVLDAI IPNCPNLSHI CLQTGLKHYH GSFELFEKIA HDTPYHEGLP RLPAPNFYYT LEDILFEEVK KKEGLTWSIH
201: RPGLIFGFSP YSMMNIIGTL CVYATICKHE GLPLRFPGSK SAWDGYSYCS DADLIAEHQI WASMDPNAKN EAFNISNGDV FKWKHLWKVL AEEFQVEAEE
301: FDESKRWTLV EMMKDKGQIW DEIVKENGLV ESKLEEIGRW WFVDLVLKKE CPLDTMNKSK EHGFLGFRNS KNAFISWIYK IKACKFVP

Best Arabidopsis Sequence Match ( AT4G24220.1 )
(BLAST)

001: MSWWWAGAIG AAKKKLDEDE PSQSFESVAL IIGVTGIVGN SLAEILPLSD TPGGPWKVYG VARRPRPTWN ADHPIDYIQC DVSDAEDTRS KLSPLTDVTH
101: VFYVTWTNRE SESENCEANG SMLRNVLQAI IPYAPNLRHV CLQTGTKHYL GPFTNVDGPR HDPPFTEDMP RLQIQNFYYT QEDILFEEIK KIETVTWSIH
201: RPNMIFGFSP YSLMNIVGTL CVYAAICKHE GSPLLFPGSK KAWEGFMTAS DADLIAEQQI WAAVDPYAKN EAFNCNNADI FKWKHLWKIL AEQFGIEEYG
301: FEEGKNLGLV EMMKGKERVW EEMVKENQLQ EKKLEEVGVW WFADVILGVE GMIDSMNKSK EYGFLGFRNS NNSFISWIDK YKAFKIVP

Arabidopsis Description

VEP13-oxo-Delta(4,5)-steroid 5-beta-reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9STX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.