Factsheet for Bra019241.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY10994	Canola	cytosol	98.94	98.94
AT4G24220.1	Thale cress	cytosol	83.38	81.44
Bra010499.1-P	Field mustard	cytosol	83.11	80.77
Bra013777.1-P	Field mustard	cytosol	82.32	80.0
KRH15431	Soybean	cytosol	12.4	69.12
KRH52063	Soybean	nucleus	69.92	68.3
Solyc10g049620.1.1	Tomato	plastid	68.87	67.27
PGSC0003DMT400013949	Potato	cytosol	68.6	67.01
VIT_18s0001g09420.t01	Wine grape	cytosol	68.34	66.41
PGSC0003DMT400025509	Potato	cytosol	65.17	63.66
Solyc10g049600.1.1	Tomato	cytosol	64.12	63.12
PGSC0003DMT400039098	Potato	cytosol	63.85	62.37
GSMUA_Achr3P30170_001	Banana	cytosol	56.46	61.67
GSMUA_Achr4P16440_001	Banana	cytosol	55.94	61.27
TraesCS3A01G506500.1	Wheat	extracellular	40.63	56.83
TraesCS3A01G506400.1	Wheat	extracellular	40.63	56.83
GSMUA_Achr6P24680_001	Banana	golgi	44.85	56.48
Os03t0436400-01	Rice	plasma membrane	58.58	56.06
Os11t0351555-01	Rice	cytosol	58.58	56.06
TraesCS3A01G507400.1	Wheat	golgi	58.58	55.92
TraesCS3B01G575500.1	Wheat	golgi	58.31	55.67
TraesCS3D01G514300.1	Wheat	plastid	57.26	55.22
PGSC0003DMT400071398	Potato	cytosol	56.99	54.55
Zm00001d029582_P001	Maize	extracellular	56.99	54.55
EER92090	Sorghum	cytosol	56.99	54.55
TraesCS3B01G574600.1	Wheat	mitochondrion	55.94	53.94
TraesCS3A01G508600.1	Wheat	cytosol	55.94	53.94
HORVU3Hr1G111650.1	Barley	cytosol, mitochondrion	57.26	53.71
Solyc01g091670.2.1	Tomato	cytosol	55.15	53.32
TraesCS3A01G506600.1	Wheat	mitochondrion	55.15	53.18
TraesCS3D01G514400.1	Wheat	plastid	55.41	52.9
EES08251	Sorghum	mitochondrion	57.52	52.78
HORVU0Hr1G007340.1	Barley	plastid	54.88	52.13
Os07t0601600-00	Rice	plasma membrane	56.2	51.95
Zm00001d029580_P001	Maize	cytosol	54.62	51.62
Zm00001d029581_P001	Maize	cytosol	53.56	50.62
TraesCS7D01G191000.1	Wheat	mitochondrion	51.45	49.62
TraesCS7B01G094800.1	Wheat	mitochondrion	51.19	49.24
HORVU7Hr1G038590.1	Barley	mitochondrion	49.87	48.34
Os03t0422600-00	Rice	mitochondrion	33.51	46.52
HORVU3Hr1G055170.1	Barley	mitochondrion	9.76	44.05
OQU92343	Sorghum	golgi	43.54	42.31
Bra002620.1-P	Field mustard	cytosol	35.09	34.46

Protein Annotations

EnsemblPlants:Bra019241.1	EnsemblPlants:Bra019241.1-P	EnsemblPlantsGene:Bra019241	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR32487
PANTHER:PTHR32487:SF0	SEG:seg	SUPFAM:SSF51735	UniParc:UPI0002540FC4	UniProt:M4DRU8	MapMan:35.1

Description

AT4G24220 (E=2e-178) VEP1, AWI31 | VEP1 (VEIN PATTERNING 1); binding / catalytic

Coordinates

chrA03:+:25520908..25522116

Molecular Weight (calculated)

42563.6 Da

IEP (calculated)

7.457

GRAVY (calculated)

-0.331

Length

379 amino acids

Sequence
(BLAST)

001: MSWWWAGAIG AAKKKIDDNY EPTQSYQSVA LIIGVTGIIG NSLAEILPLS DTPGGPWKVY GVAPSPRPTW KADHPVGYIQ CDVSNAEETR SKLSPLTDVT
101: DVFYVTCTNL ESEANGSTLR NVLRAVVPSA KNLRHVCLQT GTNHYKSLDP PFTEDMPRLK IKSNFYYTLE DVLFEEIKKK KESSTVTWSV HRPNTIFGFS
201: PYSLTNVVGT LCVYAAICKQ EGSPLLFPGS KAAWEGYTAA SDADLVAEQQ IWAAVDPYAK NEAFNCNNGD VFKWKHLWKV LAERFGIEKY GFEEGKNVGL
301: VKMMKGKERV WEEVVKKNQL QEKKLEDVGV WWFADDVLGV EGMIDSMNKS KEHGFLGFRN SKNSFISWID KYKAFKIVP

Best Arabidopsis Sequence Match ( AT4G24220.1 )
(BLAST)

001: MSWWWAGAIG AAKKKLDEDE PSQSFESVAL IIGVTGIVGN SLAEILPLSD TPGGPWKVYG VARRPRPTWN ADHPIDYIQC DVSDAEDTRS KLSPLTDVTH
101: VFYVTWTNRE SESENCEANG SMLRNVLQAI IPYAPNLRHV CLQTGTKHYL GPFTNVDGPR HDPPFTEDMP RLQIQNFYYT QEDILFEEIK KIETVTWSIH
201: RPNMIFGFSP YSLMNIVGTL CVYAAICKHE GSPLLFPGSK KAWEGFMTAS DADLIAEQQI WAAVDPYAKN EAFNCNNADI FKWKHLWKIL AEQFGIEEYG
301: FEEGKNLGLV EMMKGKERVW EEMVKENQLQ EKKLEEVGVW WFADVILGVE GMIDSMNKSK EYGFLGFRNS NNSFISWIDK YKAFKIVP

Arabidopsis Description

VEP13-oxo-Delta(4,5)-steroid 5-beta-reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9STX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.