Factsheet for Bra002620.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003171.1-P
Bra004965.1-P
Bra007047.1-P
Bra021504.1-P
Bra027406.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58750.1	Bra004965.1-P	AT2G40380.1	21798944
AT5G58750.1	Bra021504.1-P	AT3G13710.1	21798944
AT5G58750.1	Bra027406.1-P	AT3G13710.1	21798944
AT5G58750.1	Bra003171.1-P	AT3G54120.1	21798944
AT5G58750.1	Bra007047.1-P	AT3G54120.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52126	Canola	cytosol	97.41	97.66
CDY67905	Canola	cytosol	95.34	95.09
AT5G58750.1	Thale cress	cytosol	88.08	88.08
KRG98294	Soybean	mitochondrion	58.03	56.85
KRH30354	Soybean	cytosol	54.92	56.23
GSMUA_Achr5P28860_001	Banana	plastid	49.48	45.91
Bra010499.1-P	Field mustard	cytosol	35.49	35.13
Bra019241.1-P	Field mustard	cytosol	34.46	35.09
Bra013777.1-P	Field mustard	cytosol	34.46	34.1

Protein Annotations

EnsemblPlants:Bra002620.1	EnsemblPlants:Bra002620.1-P	EnsemblPlantsGene:Bra002620	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR32487
PANTHER:PTHR32487:SF7	SUPFAM:SSF51735	UniParc:UPI000254375B	UniProt:M4CEI9	MapMan:35.1	:

Description

AT5G58750 (E=1e-201) | wound-responsive protein-related

Coordinates

chrA10:+:8520272..8521432

Molecular Weight (calculated)

44084.9 Da

IEP (calculated)

6.519

GRAVY (calculated)

-0.261

Length

386 amino acids

Sequence
(BLAST)

001: MGSENGSVTN TNDDENVALI FGVTGLVGRE IVKTLAMSNK PRWRIYGVAR NPEISSMTKM YSFISCDLLN ASETKQKLSP LQDIVSHVFW VTWSGEYPLD
101: SDECCDQNRT MLANALDAIL PNAKRLKHFS LQTGMKHYVS LVGETLSRGG EGSSVCYYSE ECPRKSSGKN FYYVLEDLLK EKISGVSVVW SVQRPGLLMG
201: SSTRTLYNFM GSLCVYGAMC KYLNLPFVFG GTRECWEECY IDGSDSNLVA EQHIFAATSG RVRENGEAFN AINGVGFTWK EIWPQIGRKL GVQVNETKMF
301: DEGFWFEREM GERKYVWDEI LVKEKLVQTK IEDLANWVFM DVLFRCPFKL LGSRDKVDKF GFKRKYRTLD SILYWIDVMR EEKLIP

Best Arabidopsis Sequence Match ( AT5G58750.1 )
(BLAST)

001: MGSENGSLMR RNEVDENVAL IFGVTGLVGR EIVKTLLMSK PGWRIYGVAR NPEINSMTKM YNFISCDLLN ASETKQRLSP LQDIVSHVFW VTWSGEFPLD
101: TDECCVQNKT MLMNALDAIL PNAKRLKHFS LQTGMKHYVS LVEETMARGE GSSLYYYSEE CPRKSSGKNF YYVLEDLLKE KITRSSVVWS VQRPGLLMGS
201: SSRTLYNFMG SLCVYGAMCK YLNLPFVFGG TRECWEESYI DGSDSNLVAE QHIFAATSGK VREKGEAFNA INGVGFTWKE IWPEIGKKLG VQVNETTMFD
301: EGFWFGREMV ERKHVWDEIV VKEKLVRTEI EDLANWYFLD ALFRCPFKLL GKREKVDRFG FKRKYRTLDS VLYWIDVMRD EKLIPL

Arabidopsis Description

At5g58750 [Source:UniProtKB/TrEMBL;Acc:Q9LUY6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.