Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52126 | Canola | cytosol | 88.34 | 88.57 |
| CDY67905 | Canola | cytosol | 88.34 | 88.11 |
| Bra002620.1-P | Field mustard | cytosol | 88.08 | 88.08 |
| KRG98294 | Soybean | mitochondrion | 59.59 | 58.38 |
| KRH30354 | Soybean | cytosol | 55.44 | 56.76 |
| GSMUA_Achr5P28860_001 | Banana | plastid | 48.96 | 45.43 |
| AT4G24220.1 | Thale cress | cytosol | 34.2 | 34.02 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | EntrezGene:835989 | UniProt:A0A178UAG8 | ProteinID:AED97094.1 | ProteinID:ANM68769.1 |
| ArrayExpress:AT5G58750 | EnsemblPlantsGene:AT5G58750 | RefSeq:AT5G58750 | TAIR:AT5G58750 | RefSeq:AT5G58750-TAIR-G | EnsemblPlants:AT5G58750.1 |
| TAIR:AT5G58750.1 | ProteinID:BAA97343.1 | EMBL:BT029538 | GO:GO:0005575 | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_001330491.1 |
| RefSeq:NP_200683.1 | ProteinID:OAO90753.1 | PO:PO:0009005 | PANTHER:PTHR32487 | PANTHER:PTHR32487:SF7 | UniProt:Q9LUY6 |
| SUPFAM:SSF51735 | UniParc:UPI00000A0E92 | : | : | : | : |
Description
At5g58750 [Source:UniProtKB/TrEMBL;Acc:Q9LUY6]
Coordinates
chr5:+:23728588..23730142
Molecular Weight (calculated)
44503.7 Da
IEP (calculated)
7.359
GRAVY (calculated)
-0.255
Length
386 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSENGSLMR RNEVDENVAL IFGVTGLVGR EIVKTLLMSK PGWRIYGVAR NPEINSMTKM YNFISCDLLN ASETKQRLSP LQDIVSHVFW VTWSGEFPLD
101: TDECCVQNKT MLMNALDAIL PNAKRLKHFS LQTGMKHYVS LVEETMARGE GSSLYYYSEE CPRKSSGKNF YYVLEDLLKE KITRSSVVWS VQRPGLLMGS
201: SSRTLYNFMG SLCVYGAMCK YLNLPFVFGG TRECWEESYI DGSDSNLVAE QHIFAATSGK VREKGEAFNA INGVGFTWKE IWPEIGKKLG VQVNETTMFD
301: EGFWFGREMV ERKHVWDEIV VKEKLVRTEI EDLANWYFLD ALFRCPFKLL GKREKVDRFG FKRKYRTLDS VLYWIDVMRD EKLIPL
101: TDECCVQNKT MLMNALDAIL PNAKRLKHFS LQTGMKHYVS LVEETMARGE GSSLYYYSEE CPRKSSGKNF YYVLEDLLKE KITRSSVVWS VQRPGLLMGS
201: SSRTLYNFMG SLCVYGAMCK YLNLPFVFGG TRECWEESYI DGSDSNLVAE QHIFAATSGK VREKGEAFNA INGVGFTWKE IWPEIGKKLG VQVNETTMFD
301: EGFWFGREMV ERKHVWDEIV VKEKLVRTEI EDLANWYFLD ALFRCPFKLL GKREKVDRFG FKRKYRTLDS VLYWIDVMRD EKLIPL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.